RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 IL2P60568 153 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 FRMD7Q6ZUT3 714 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 MMAAQ8IVH4 418 aaKnown RBP13.53□□□□□ -0.24
HCFC2-202ENST00000544223 TIFAQ96CG3 184 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 C3orf30Q96M34 536 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 HBEGFQ99075 208 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 RIOK2Q9BVS4 552 aaKnown RBP13.53□□□□□ -0.24
HCFC2-202ENST00000544223 CADM1Q9BY67 442 aaKnown RBP13.53□□□□□ -0.24
HCFC2-202ENST00000544223 CEP44Q9C0F1 390 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 TCF7L2Q9NQB0 619 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 TAS2R1Q9NYW7 299 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 TIMM22Q9Y584 194 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 TMEM202A6NGA9 273 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 FADS2P1A8MWK0 482 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 B2RBV5 119 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 HDAC3O15379 428 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 HOXC11O43248 304 aaPredicted RBP13.52□□□□□ -0.24
HCFC2-202ENST00000544223 IMPDH1P20839 514 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 GDI1P31150 447 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 OPRD1P41143 372 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 IL12RB1P42701 662 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 GDF5P43026 501 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 RPL26P61254 145 aaKnown RBP13.52□□□□□ -0.24
HCFC2-202ENST00000544223 BTKQ06187 659 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 ARHGEF7Q14155 803 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 TCHHL1Q5QJ38 904 aaPredicted RBP13.52□□□□□ -0.24
HCFC2-202ENST00000544223 ANKRD54Q6NXT1 300 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 ZNF641Q96N77 438 aaPredicted RBP13.52□□□□□ -0.24
HCFC2-202ENST00000544223 TUBGCP5Q96RT8 1024 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 DERL2Q9GZP9 239 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 MID1IP1Q9NPA3 183 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 CLDND1Q9NY35 253 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 EIF2B4Q9UI10 523 aaKnown RBP13.52□□□□□ -0.24
HCFC2-202ENST00000544223 MID2Q9UJV3 735 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 RPL26L1Q9UNX3 145 aaKnown RBP13.52□□□□□ -0.24
HCFC2-202ENST00000544223 BTRCQ9Y297 605 aa13.52□□□□□ -0.24
HCFC2-202ENST00000544223 C9JVG2 144 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 SMIM24O75264 130 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 ESR1P03372 595 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 SERPINA6P08185 405 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 NME5P56597 212 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 ST8SIA6P61647 398 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 HERVK_113P63132 956 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 SLC25A3Q00325 362 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 PRKAA1Q13131 559 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 PHKG1Q16816 387 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
HCFC2-202ENST00000544223 C9orf64Q5T6V5 341 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 EGFLAMQ63HQ2 1017 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 CYHR1Q6ZMK1 362 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 VRK3Q8IV63 474 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 FBXO39Q8N4B4 442 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 LILRA3Q8N6C8 439 aaPredicted RBP13.52□□□□□ -0.25
HCFC2-202ENST00000544223 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.52□□□□□ -0.25
HCFC2-202ENST00000544223 RBM15BQ8NDT2 890 aaKnown RBP13.52□□□□□ -0.25
HCFC2-202ENST00000544223 KCNJ9Q92806 393 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 KIAA1191Q96A73 305 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 ERVK-6Q9BXR3 956 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 ZBTB26Q9HCK0 441 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 DNAJC28Q9NX36 388 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 APPL1Q9UKG1 709 aa13.52□□□□□ -0.25
HCFC2-202ENST00000544223 SPINT1O43278 529 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 NFATC1O95644 943 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 PYGLP06737 847 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 TPBGLP0DKB5 382 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 ALOX15P16050 662 aaPredicted RBP13.51□□□□□ -0.25
HCFC2-202ENST00000544223 ZNF7P17097 686 aaPredicted RBP13.51□□□□□ -0.25
HCFC2-202ENST00000544223 XPAP23025 273 aaPredicted RBP13.51□□□□□ -0.25
HCFC2-202ENST00000544223 AKT1P31749 480 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 KPNA2P52292 529 aaKnown RBP13.51□□□□□ -0.25
HCFC2-202ENST00000544223 SLC44A4Q53GD3 710 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 GRAMD4Q6IC98 578 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 METTL3Q86U44 580 aaKnown RBP13.51□□□□□ -0.25
HCFC2-202ENST00000544223 STAG3L4Q8TBR4 150 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 SKA2Q8WVK7 121 aaPredicted RBP13.51□□□□□ -0.25
HCFC2-202ENST00000544223 ARRDC3Q96B67 414 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 LRMDAQ9H2I8 198 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 SYTL2Q9HCH5 934 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 KLC4Q9NSK0 619 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 CD274Q9NZQ7 290 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 BAIAP2L1Q9UHR4 511 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 CDH7Q9ULB5 785 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 COMMD10Q9Y6G5 202 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 ZNF106Q9H2Y7 1883 aaKnown RBP13.51□□□□□ -0.25
HCFC2-202ENST00000544223 KERAO60938 352 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 CDK14O94921 469 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 EPHX1P07099 455 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 CCR7P32248 378 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 ARL1P40616 181 aaPredicted RBP13.51□□□□□ -0.25
HCFC2-202ENST00000544223 DNAJB13P59910 316 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 HSPA14Q0VDF9 509 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 RALGDSQ12967 914 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 RUNX3Q13761 415 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 BOP1Q14137 746 aaKnown RBP13.51□□□□□ -0.25
HCFC2-202ENST00000544223 ZNF805Q5CZA5 627 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 GPRC6AQ5T6X5 926 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 ARMC3Q5W041 872 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 LCA5Q86VQ0 697 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 RBFAQ8N0V3 343 aa13.51□□□□□ -0.25
HCFC2-202ENST00000544223 CNPY4Q8N129 248 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms