RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 KIFC1Q9BW19 673 aa18.14■□□□□ 0.49
COPS7A-216ENST00000543170 TREX1Q9NSU2 369 aa18.14■□□□□ 0.49
COPS7A-216ENST00000543170 SPATS2LQ9NUQ6 558 aaKnown RBP18.14■□□□□ 0.49
COPS7A-216ENST00000543170 SIRPGQ9P1W8 387 aa18.14■□□□□ 0.49
COPS7A-216ENST00000543170 PADI4Q9UM07 663 aa18.14■□□□□ 0.49
COPS7A-216ENST00000543170 PRKAB1Q9Y478 270 aa18.14■□□□□ 0.49
COPS7A-216ENST00000543170 DNMT3AQ9Y6K1 912 aaPredicted RBP18.14■□□□□ 0.49
COPS7A-216ENST00000543170 SPEGQ15772 3267 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 KLHL33A6NCF5 533 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 PRR19A6NJB7 356 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 B4DGG1 531 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 CFAP99D6REC4 459 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 RALBP11234 206 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 MGAT1P26572 445 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 FOXN2P32314 431 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 MAGEA3P43357 314 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 SMAD1Q15797 465 aaKnown RBP18.13■□□□□ 0.49
COPS7A-216ENST00000543170 BCL7AQ4VC05 210 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 ZRANB3Q5FWF4 1079 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 GUSBP11Q6P575 273 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 C11orf96Q7Z7L8 435 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 TRAPPC5Q8IUR0 188 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 PNPLA1Q8N8W4 532 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 RASGEF1AQ8N9B8 481 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 SPATA4Q8NEY3 305 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 IFI44Q8TCB0 444 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.13■□□□□ 0.49
COPS7A-216ENST00000543170 ZNF778Q96MU6 729 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 COPS8Q99627 209 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 SYBUQ9NX95 663 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 ZDHHC3Q9NYG2 299 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 SLC2A6Q9UGQ3 507 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 SOX13Q9UN79 622 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 PLEKHM1Q9Y4G2 1056 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 ASXL3Q9C0F0 2248 aa18.13■□□□□ 0.49
COPS7A-216ENST00000543170 CCDC78A2IDD5 438 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 A6NCN8 305 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 SMAPO00193 183 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 SLC2A4P14672 509 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 PNLIPP16233 465 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 GLB1P16278 677 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 ZNF7P17097 686 aaPredicted RBP18.12■□□□□ 0.49
COPS7A-216ENST00000543170 VCLP18206 1134 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 IVDP26440 423 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 CTSCP53634 463 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 PRAMEP78395 509 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 B4GALNT1Q00973 533 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 DMPKQ09013 629 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 FOXC1Q12948 553 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 ITIH4Q14624 930 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 INSCQ1MX18 579 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 EFL1Q7Z2Z2 1120 aaKnown RBP18.12■□□□□ 0.49
COPS7A-216ENST00000543170 NAGSQ8N159 534 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 GALNT15Q8N3T1 639 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 HDAC10Q969S8 669 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 DCUN1D1Q96GG9 259 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 CHRAC1Q9NRG0 131 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 GULP1Q9UBP9 304 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 KCNK6Q9Y257 313 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 RP1P56715 2156 aa18.12■□□□□ 0.49
COPS7A-216ENST00000543170 CCDC162PA2VCL2 907 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 FAM221BA6H8Z2 402 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 TTI1O43156 1089 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 NUDT21O43809 227 aaKnown RBP18.11■□□□□ 0.49
COPS7A-216ENST00000543170 GOT2P00505 430 aaKnown RBP18.11■□□□□ 0.49
COPS7A-216ENST00000543170 MYF5P13349 255 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 PRLHRP49683 370 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 TERF1P54274 439 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 CRADDP78560 199 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 CKAP4Q07065 602 aaKnown RBP18.11■□□□□ 0.49
COPS7A-216ENST00000543170 LYPLAL1Q5VWZ2 237 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 DHRS13Q6UX07 377 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 PACS1Q6VY07 963 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 CERS6Q6ZMG9 384 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 TMPRSS7Q7RTY8 843 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 ZNF438Q7Z4V0 828 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 SERPINA9Q86WD7 417 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 PIANPQ8IYJ0 282 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 CACTIN-AS1Q8N1I8 211 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 SFRP1Q8N474 314 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 WDR48Q8TAF3 677 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 LINC00615Q96LM1 132 aaPredicted RBP18.11■□□□□ 0.49
COPS7A-216ENST00000543170 KRT12Q99456 494 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 KLC4Q9NSK0 619 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 CDC23Q9UJX2 597 aa18.11■□□□□ 0.49
COPS7A-216ENST00000543170 PIKFYVEQ9Y2I7 2098 aa18.1■□□□□ 0.49
COPS7A-216ENST00000543170 COL27A1Q8IZC6 1860 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-216ENST00000543170 MAGEB16A2A368 324 aa18.1■□□□□ 0.49
COPS7A-216ENST00000543170 CPED1A4D0V7 1026 aa18.1■□□□□ 0.49
COPS7A-216ENST00000543170 FAM187AA6NFU0 413 aa18.1■□□□□ 0.49
COPS7A-216ENST00000543170 OR5K4A6NMS3 321 aa18.1■□□□□ 0.49
COPS7A-216ENST00000543170 NDC80O14777 642 aa18.1■□□□□ 0.49
COPS7A-216ENST00000543170 HYAL3O43820 417 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-216ENST00000543170 F3P13726 295 aa18.1■□□□□ 0.49
COPS7A-216ENST00000543170 ATP1B2P14415 290 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-216ENST00000543170 FASLGP48023 281 aa18.1■□□□□ 0.49
COPS7A-216ENST00000543170 CDKN1CP49918 316 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-216ENST00000543170 NR1D2Q14995 579 aa18.1■□□□□ 0.49
COPS7A-216ENST00000543170 MORF4L2Q15014 288 aa18.1■□□□□ 0.49
COPS7A-216ENST00000543170 DBN1Q16643 649 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms