RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 EPB41L1Q9H4G0 881 aa17.22■□□□□ 0.35
LTBR-210ENST00000542830 SSUH2Q9Y2M2 353 aa17.22■□□□□ 0.35
LTBR-210ENST00000542830 SCN8AQ9UQD0 1980 aa17.22■□□□□ 0.35
LTBR-210ENST00000542830 GLYATL1P3A0A0U1RQE8 302 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 STX7O15400 261 aaKnown RBP17.21■□□□□ 0.35
LTBR-210ENST00000542830 KCNJ13O60928 360 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 MTX2O75431 263 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 THRAP10827 490 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 HOXB3P14651 431 aaPredicted RBP17.21■□□□□ 0.35
LTBR-210ENST00000542830 ZNF7P17097 686 aaPredicted RBP17.21■□□□□ 0.35
LTBR-210ENST00000542830 VCLP18206 1134 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 ITIH1P19827 911 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 CD82P27701 267 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 PSMB4P28070 264 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 CSF2RBP32927 897 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 GSDMDP57764 484 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 CLN3Q13286 438 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 C16orf72Q14CZ0 275 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 SOWAHCQ53LP3 525 aaPredicted RBP17.21■□□□□ 0.35
LTBR-210ENST00000542830 LDLRAP1Q5SW96 308 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 AADACL2Q6P093 401 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 FAM151BQ6UXP7 276 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 RANBP10Q6VN20 620 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 CCDC112Q8NEF3 446 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 GORASP1Q9BQQ3 440 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 TSGA10Q9BZW7 698 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 PRDM8Q9NQV8 689 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 CPNE7Q9UBL6 633 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 TRIM10Q9UDY6 481 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 FEZ2Q9UHY8 353 aaPredicted RBP17.21■□□□□ 0.35
LTBR-210ENST00000542830 TMPRSS11EQ9UL52 423 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 NBEAQ8NFP9 2946 aa17.21■□□□□ 0.35
LTBR-210ENST00000542830 C5orf60A6NFR6 353 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 EIF4E1BA6NMX2 242 aaKnown RBP17.2■□□□□ 0.34
LTBR-210ENST00000542830 C2orf81A6NN90 581 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 FTCDO95954 541 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 AGTP01019 485 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 LPOP22079 712 aaPredicted RBP17.2■□□□□ 0.34
LTBR-210ENST00000542830 CSTF2P33240 577 aaKnown RBP eCLIP17.2■□□□□ 0.34
LTBR-210ENST00000542830 ADRA1AP35348 466 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 MAPK10P53779 464 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 PDE1BQ01064 536 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 VAC14Q08AM6 782 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 NFATC2Q13469 925 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 TAF1AQ15573 450 aaPredicted RBP17.2■□□□□ 0.34
LTBR-210ENST00000542830 CHRNA6Q15825 494 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 PLA2G4EQ3MJ16 856 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 KHDC1Q4VXA5 237 aaKnown RBP17.2■□□□□ 0.34
LTBR-210ENST00000542830 WDR74Q6RFH5 385 aaPredicted RBP17.2■□□□□ 0.34
LTBR-210ENST00000542830 ZNF761Q86XN6 746 aaPredicted RBP17.2■□□□□ 0.34
LTBR-210ENST00000542830 TRAPPC5Q8IUR0 188 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 ZNF547Q8IVP9 402 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 AGBL5Q8NDL9 886 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 DDHD1Q8NEL9 900 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 CCDC110Q8TBZ0 833 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 USP7Q93009 1102 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 FAM118BQ9BPY3 351 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 UCK1Q9HA47 277 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 SMOXQ9NWM0 555 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 PDP2Q9P2J9 529 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 SLC23A2Q9UGH3 650 aa17.2■□□□□ 0.34
LTBR-210ENST00000542830 PACSIN2Q9UNF0 486 aaPredicted RBP17.2■□□□□ 0.34
LTBR-210ENST00000542830 LILRA5A6NI73 299 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 PDZK1P1A8MUH7 402 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 DDX3YO15523 660 aaKnown RBP17.19■□□□□ 0.34
LTBR-210ENST00000542830 LIPCP11150 499 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 XRCC1P18887 633 aaPredicted RBP17.19■□□□□ 0.34
LTBR-210ENST00000542830 IDSP22304 550 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 ETV5P41161 510 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 UBE2IP63279 158 aaKnown RBP17.19■□□□□ 0.34
LTBR-210ENST00000542830 CFHR1Q03591 330 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 WASH2PQ6VEQ5 465 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 TRIM48Q8IWZ4 208 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 LSM14AQ8ND56 463 aaKnown RBP17.19■□□□□ 0.34
LTBR-210ENST00000542830 RCBTB1Q8NDN9 531 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 SNRNP27Q8WVK2 155 aaKnown RBP17.19■□□□□ 0.34
LTBR-210ENST00000542830 HES6Q96HZ4 224 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 C19orf43Q9BQ61 176 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 CPNE5Q9HCH3 593 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 WASH6PQ9NQA3 447 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 DNAJC16Q9Y2G8 782 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 ARL5AQ9Y689 179 aa17.19■□□□□ 0.34
LTBR-210ENST00000542830 DNMT3AQ9Y6K1 912 aaPredicted RBP17.19■□□□□ 0.34
LTBR-210ENST00000542830 PRAMEF33A0A0G2JMD5 474 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 PRR19A6NJB7 356 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 C9orf172C9J069 976 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 AGRPO00253 132 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 BUD23O43709 281 aaKnown RBP17.18■□□□□ 0.34
LTBR-210ENST00000542830 KRT86O43790 486 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 UGT1A9O60656 530 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 PRAMEF10O60809 474 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 CRTAMO95727 393 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 VIPP01282 170 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 UGT1A6P19224 532 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 UGT1A1P22309 533 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 UGT1A4P22310 534 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 UGT1A3P35503 534 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 RHDQ02161 417 aa17.18■□□□□ 0.34
LTBR-210ENST00000542830 KLF1Q13351 362 aaPredicted RBP17.18■□□□□ 0.34
LTBR-210ENST00000542830 PARP6Q2NL67 630 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms