RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SEC14L1Q92503 715 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 ZNF669Q96BR6 464 aaPredicted RBP15.31■□□□□ 0.04
DDB1-218ENST00000540784 OR2M4Q96R27 311 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 TRIM56Q9BRZ2 755 aaKnown RBP15.31■□□□□ 0.04
DDB1-218ENST00000540784 FAM114A2Q9NRY5 505 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 CATSPERZQ9NTU4 200 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 DMGDHQ9UI17 866 aaKnown RBP15.31■□□□□ 0.04
DDB1-218ENST00000540784 FAM169AQ9Y6X4 670 aa15.31■□□□□ 0.04
DDB1-218ENST00000540784 ZNF292O60281 2723 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 ESYT3A0FGR9 886 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 TPP1O14773 563 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 TM4SF5O14894 197 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 KMOO15229 486 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 ATP1B2P14415 290 aaPredicted RBP15.3■□□□□ 0.04
DDB1-218ENST00000540784 PMLP29590 882 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 CTBSQ01459 385 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 CBLBQ13191 982 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 LRP8Q14114 963 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 AARS2Q5JTZ9 985 aaKnown RBP15.3■□□□□ 0.04
DDB1-218ENST00000540784 KIAA0930Q6ICG6 404 aaPredicted RBP15.3■□□□□ 0.04
DDB1-218ENST00000540784 MRNIPQ6NTE8 343 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 NEPROQ6NW34 567 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 TMEM220Q6QAJ8 160 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 DET1Q7L5Y6 550 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 LRRTM4Q86VH4 590 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 IGDCC3Q8IVU1 814 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 NAXDQ8IW45 347 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 CCL4L1Q8NHW4 92 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 IFT81Q8WYA0 676 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 SGF29Q96ES7 293 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 ZNF514Q96K75 400 aaPredicted RBP15.3■□□□□ 0.04
DDB1-218ENST00000540784 DUSP23Q9BVJ7 150 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 GSDMCQ9BYG8 508 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 SLC32A1Q9H598 525 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 NLGN3Q9NZ94 848 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 ZC3H7BQ9UGR2 993 aaKnown RBP15.3■□□□□ 0.04
DDB1-218ENST00000540784 GPR34Q9UPC5 381 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 BTBD3Q9Y2F9 522 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 PLEKHM1Q9Y4G2 1056 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 TEX264Q9Y6I9 313 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 DNMT3AQ9Y6K1 912 aaPredicted RBP15.3■□□□□ 0.04
DDB1-218ENST00000540784 LAMA1P25391 3075 aa15.3■□□□□ 0.04
DDB1-218ENST00000540784 ZCWPW2A0A1B0GU75 182 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 TRIM38O00635 465 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 EIF3HO15372 352 aaKnown RBP eCLIP15.29■□□□□ 0.04
DDB1-218ENST00000540784 POP7O75817 140 aaKnown RBP15.29■□□□□ 0.04
DDB1-218ENST00000540784 CELA2BP08218 269 aaPredicted RBP15.29■□□□□ 0.04
DDB1-218ENST00000540784 ARCN1P48444 511 aaKnown RBP15.29■□□□□ 0.04
DDB1-218ENST00000540784 THOC5Q13769 683 aaKnown RBP15.29■□□□□ 0.04
DDB1-218ENST00000540784 ITIH4Q14624 930 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 DBN1Q16643 649 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 LONRF1Q17RB8 773 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 DEFB133Q30KQ1 61 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 SPANXN3Q5MJ09 141 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 CRTC3Q6UUV7 619 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 ZDHHC24Q6UX98 284 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 PIP4P1Q86T03 277 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 TRAPPC5Q8IUR0 188 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 ANKMY2Q8IV38 441 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 OTUD6BQ8N6M0 293 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.29■□□□□ 0.04
DDB1-218ENST00000540784 FAM46DQ8NEK8 389 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 OR4C6Q8NH72 309 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 FBXO25Q8TCJ0 367 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 CAMK1GQ96NX5 476 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 RTKNQ9BST9 563 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 FOXP3Q9BZS1 431 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 C20orf96Q9NUD7 363 aaPredicted RBP15.29■□□□□ 0.04
DDB1-218ENST00000540784 PCOLCE2Q9UKZ9 415 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 CHMP2BQ9UQN3 213 aa15.29■□□□□ 0.04
DDB1-218ENST00000540784 PCYT1BQ9Y5K3 369 aaPredicted RBP15.29■□□□□ 0.04
DDB1-218ENST00000540784 IGLV3-16A0A075B6K0 115 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 OR2AG2A6NM03 316 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 BHMG1C9JSJ3 638 aaPredicted RBP15.28■□□□□ 0.04
DDB1-218ENST00000540784 GOLGA8KD6RF30 607 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 E7ESA3 106 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 GOLGA8TH3BQL2 631 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 PFDN6O15212 129 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 SIGLEC6O43699 453 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 KCNJ13O60928 360 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 NDUFS3O75489 264 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 LDOC1O95751 146 aaPredicted RBP15.28■□□□□ 0.04
DDB1-218ENST00000540784 RHOXF2BP0C7M4 288 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 GIMD1P0DJR0 217 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 ACP5P13686 325 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 ZNF7P17097 686 aaPredicted RBP15.28■□□□□ 0.04
DDB1-218ENST00000540784 AK4P27144 223 aaPredicted RBP15.28■□□□□ 0.04
DDB1-218ENST00000540784 ARNTP27540 789 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 NSG1P42857 185 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 TTPAP49638 278 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 CTSCP53634 463 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 B4GALNT1Q00973 533 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 LDB1Q86U70 411 aaPredicted RBP15.28■□□□□ 0.04
DDB1-218ENST00000540784 NRROSQ86YC3 692 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 ZNF547Q8IVP9 402 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 PALM2Q8IXS6 379 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 IFT20Q8IY31 132 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 ZBED8Q8IZ13 594 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 PNPLA1Q8N8W4 532 aa15.28■□□□□ 0.04
DDB1-218ENST00000540784 FBXO36Q8NEA4 188 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms