RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 HLA-DPA1P20036 260 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 CTNNA1P35221 906 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 CYLC1P35663 651 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 RAB15P59190 212 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 TMEM115Q12893 351 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 SPA17Q15506 151 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 SLC1A5Q15758 541 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 LINC00303Q3SY05 128 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 ATP13A5Q4VNC0 1218 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 MANEAQ5SRI9 462 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 KIAA1614Q5VZ46 1190 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 ALS2CLQ60I27 953 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 KAZNQ674X7 775 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 PID1Q7Z2X4 250 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 LRRTM4Q86VH4 590 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 ZNF761Q86XN6 746 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 CCDC112Q8NEF3 446 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 BRSK1Q8TDC3 778 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 AHCYL2Q96HN2 611 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 ARFGAP3Q9NP61 516 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 LUC7LQ9NQ29 371 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 KLC4Q9NSK0 619 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 SCHIP1Q9P0W5 487 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 ZNF624Q9P2J8 865 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 TFR2Q9UP52 801 aa12.92□□□□□ -0.34
SEMA4D-223ENST00000540475 RCCD1A6NED2 376 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 GAPDHSO14556 408 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 PJA2O43164 708 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 CDK14O94921 469 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 NDUFA10O95299 355 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 BRAFP15056 766 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 MPSTP25325 297 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 UGT1A3P35503 534 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 SLC19A1P41440 591 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 DMPKQ09013 629 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 MSLNQ13421 630 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 NFATC2Q13469 925 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 NOMO1Q15155 1222 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 LLGL1Q15334 1064 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 DCAF12Q5T6F0 453 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 RANBP10Q6VN20 620 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 TMEM26Q6ZUK4 368 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 ZC3H18Q86VM9 953 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 TMTC1Q8IUR5 882 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 KLHDC8BQ8IXV7 354 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 TEFMQ96QE5 360 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 C19orf43Q9BQ61 176 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 GORASP1Q9BQQ3 440 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 ZPBPQ9BS86 351 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 TBC1D10AQ9BXI6 508 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 SMOXQ9NWM0 555 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 SLC39A1Q9NY26 324 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 OGFRQ9NZT2 677 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 KLHL8Q9P2G9 620 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 PILRAQ9UKJ1 303 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 REXO2Q9Y3B8 237 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 PCDHGA4Q9Y5G9 962 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 B3GALT1Q9Y5Z6 326 aa12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 DNMT3AQ9Y6K1 912 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-223ENST00000540475 AGAP14A8MT82 685 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 TOX3O15405 576 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 SNX2O60749 519 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 PLA2G2AP14555 144 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 CTNNA2P26232 953 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 ADRA1AP35348 466 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 CHRNA4P43681 627 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 ZNF75DP51815 510 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 LY6DQ14210 128 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 ZNF605Q86T29 641 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 DAAM2Q86T65 1068 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 PLXDC1Q8IUK5 500 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 RBM12BQ8IXT5 1001 aaKnown RBP12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 EXD3Q8N9H8 876 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 DDHD1Q8NEL9 900 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 NCSTNQ92542 709 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 ART4Q93070 314 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 RTP4Q96DX8 246 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 SLC12A9Q9BXP2 914 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 RAB33BQ9H082 229 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 GBA3Q9H227 469 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 BPIFA1Q9NP55 256 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 SLC40A1Q9NP59 571 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 POT1Q9NUX5 634 aa12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 SIDT1Q9NXL6 827 aaKnown RBP12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 TMEM184BQ9Y519 407 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-223ENST00000540475 EFCAB7A8K855 629 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 B8ZZF3 427 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 AGRPO00253 132 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 MTX2O75431 263 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 IDSP22304 550 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 RBL1P28749 1068 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 CA5AP35218 305 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 SPAM1P38567 509 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 INSCQ1MX18 579 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 LDLRAP1Q5SW96 308 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 ANKS6Q68DC2 871 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 VASH2Q86V25 355 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 CCDC50Q8IVM0 306 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 LRRC57Q8N9N7 239 aa12.89□□□□□ -0.35
SEMA4D-223ENST00000540475 ZSCAN1Q8NBB4 408 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms