RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 FLRT1Q9NZU1 646 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 RAP2CQ9Y3L5 183 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 C15orf38-AP3S2A0A0A6YYH1 394 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 OR51F1A6NGY5 319 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 LAMTOR5O43504 91 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 B3GALT2O43825 422 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 RFPL2O75678 378 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 MPSTP25325 297 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 VIPR1P32241 457 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 HK2P52789 917 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 RPL6Q02878 288 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 HSPB3Q12988 150 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 RFTN1Q14699 578 aaPredicted RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 TSNQ15631 228 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 NPY5RQ15761 445 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 MYLK3Q32MK0 819 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 MORN1Q5T089 497 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 TPRG1Q6ZUI0 275 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 ARPINQ7Z6K5 226 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 CMTR2Q8IYT2 770 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 ACMSDQ8TDX5 336 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SMPDL3BQ92485 455 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 MTERF3Q96E29 417 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 IPPKQ9H8X2 491 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 DDX18Q9NVP1 670 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 NUDT4Q9NZJ9 180 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 ANAPC2Q9UJX6 822 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 RPS6KA6Q9UK32 745 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 MAP4K5Q9Y4K4 846 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 TELO2Q9Y4R8 837 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 COPG1Q9Y678 874 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 SLC6A2P23975 617 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 RPL10P27635 214 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 GKP32189 559 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SEPHS1P49903 392 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 MAPK12P53778 367 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 FAM220AQ7Z4H9 259 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 GKN2Q86XP6 184 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 CADM2Q8N3J6 435 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 FAM98AQ8NCA5 519 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 PCDH19Q8TAB3 1148 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 ZNF607Q96SK3 696 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 APOL4Q9BPW4 351 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 ARHGAP9Q9BRR9 750 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 LRTM1Q9HBL6 345 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 MIOSQ9NXC5 875 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 REXO2Q9Y3B8 237 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 KDM3BQ7LBC6 1761 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 COCHO43405 550 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 STK16O75716 305 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 PLA2G16P53816 162 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 STXBP1P61764 594 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 MYBPC1Q00872 1141 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 HNRNPDQ14103 355 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 OASLQ15646 514 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 TTMPQ5BVD1 217 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 HGSNATQ68CP4 663 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 KCT2Q8NC54 265 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SMG8Q8ND04 991 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 CPT1BQ92523 772 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 C8orf48Q96LL4 319 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 C5orf34Q96MH7 638 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SGIP1Q9BQI5 828 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SLITRK2Q9H156 845 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 EPB41L4BQ9H329 900 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 LRRC4CQ9HCJ2 640 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SLC17A7Q9P2U7 560 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 PLAGL1Q9UM63 463 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 TRAF6Q9Y4K3 522 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 ACTL7BQ9Y614 415 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 UBR2Q8IWV8 1755 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 A0A0G2JN53 185 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 HEPACAM2A8MVW5 462 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 GJB5O95377 273 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 CAPN1P07384 714 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 TSPAN19P0C672 248 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 H2AFXP16104 143 aaPredicted RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 AGXTP21549 392 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 NSG1P42857 185 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 CCR3P51677 355 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SPIRE1Q08AE8 756 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 BST1Q10588 318 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 CHIT1Q13231 466 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 CCINQ13939 588 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 FASTKD3Q14CZ7 662 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 ZCWPW2Q504Y3 356 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SPDYCQ5MJ68 293 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 IZUMO2Q6UXV1 221 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 CHRDL2Q6WN34 429 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 SNX20Q7Z614 316 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 ALYREFQ86V81 257 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 DENND6AQ8IWF6 608 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 DTNBP1Q96EV8 351 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 AGAP2Q99490 1192 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 ACSS3Q9H6R3 686 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 ELL3Q9HB65 397 aaPredicted RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 EXD2Q9NVH0 621 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 CNOT6Q9ULM6 557 aaKnown RBP5.31□□□□□ -1.56
LRP6-203ENST00000538239 MYH1P12882 1939 aa5.31□□□□□ -1.56
LRP6-203ENST00000538239 ALOX15BO15296 676 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms