RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ZNF639Q9UID6 485 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 SLC39A10Q9ULF5 831 aa10.61□□□□□ -0.71
RTN3-208ENST00000537981 TCP10L2B9ZVM9 353 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 DFFAO00273 331 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 HNRNPDLO14979 420 aaKnown RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 RAD17O75943 681 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 PGLSO95336 258 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 NTRK1P04629 796 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 DDCP20711 480 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 SLC6A2P23975 617 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 SHMT1P34896 483 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 ARHGDIAP52565 204 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 PLK1P53350 603 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 TPD52P55327 224 aaPredicted RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 GNA13Q14344 377 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 STXBP2Q15833 593 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 ESCO2Q56NI9 601 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 PRSS36Q5K4E3 855 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 RBM48Q5RL73 367 aaKnown RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 TPRG1LQ5T0D9 272 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 LCN8Q6JVE9 175 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 TRIM48Q8IWZ4 208 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 FAM86B1Q8N7N1 296 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 RAET1EQ8TD07 263 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 TIFAQ96CG3 184 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 LRRC39Q96DD0 335 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 ZHX1-C8orf76Q96EF9 292 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 BDH2Q9BUT1 245 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 C1QTNF1Q9BXJ1 281 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.6□□□□□ -0.713e-6■□□□□ 8.9
RTN3-208ENST00000537981 FAM49AQ9H0Q0 323 aaPredicted RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 POLMQ9NP87 494 aaPredicted RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 NECTIN3Q9NQS3 549 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 INTS10Q9NVR2 710 aaKnown RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 EHD3Q9NZN3 535 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 GTF2A1LQ9UNN4 478 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 SNX5Q9Y5X3 404 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 METTL15A6NJ78 407 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 AQP12BA6NM10 295 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 FADS2P1A8MWK0 482 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 H0YAE9 185 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 SGTAO43765 313 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 PRSS23O95084 383 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 LDLRP01130 860 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 IMPDH1P20839 514 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 KCNA5P22460 613 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 TGFBR2P37173 567 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 GP5P40197 560 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 MAGEA6P43360 314 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 MADCAM1Q13477 382 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 GRM7Q14831 915 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 CLCA4Q14CN2 919 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 FSCN1Q16658 493 aaKnown RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 HADHQ16836 314 aaKnown RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 AOC3Q16853 763 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 ZNF404Q494X3 552 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 FAM45BPQ6NSW5 357 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 ZYG11AQ6WRX3 759 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 ZNF517Q6ZMY9 492 aaPredicted RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 AQP12AQ8IXF9 295 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 UBE2J2Q8N2K1 259 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 FSTL5Q8N475 847 aaPredicted RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 PNPLA1Q8N8W4 532 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 ANKRD52Q8NB46 1076 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 MCUQ8NE86 351 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 FAM45AQ8TCE6 357 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 FBXW5Q969U6 566 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 TRMT2BQ96GJ1 504 aaKnown RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 RNF157Q96PX1 679 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 KIFC1Q9BW19 673 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 CARS2Q9HA77 564 aaKnown RBP10.6□□□□□ -0.71
RTN3-208ENST00000537981 SAGE1Q9NXZ1 904 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 XPR1Q9UBH6 696 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 SLC23A1Q9UHI7 598 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 SNX7Q9UNH6 387 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 PCDHGB6Q9Y5F9 930 aa10.6□□□□□ -0.71
RTN3-208ENST00000537981 MEIOCA2RUB1 952 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 OR6C70A6NIJ9 312 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 INO80B-WBP1J3KQ70 363 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 PPP6CO00743 305 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 CAPN5O15484 640 aaPredicted RBP10.59□□□□□ -0.71
RTN3-208ENST00000537981 GAS2O43903 313 aaKnown RBP10.59□□□□□ -0.71
RTN3-208ENST00000537981 PLA2G6O60733 806 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 HUS1O60921 280 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 PRKCBP05771 671 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 IL7P13232 177 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 PTGER2P43116 358 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 BCAR1P56945 870 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 KCNAB2Q13303 367 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 TRIP4Q15650 581 aaPredicted RBP10.59□□□□□ -0.71
RTN3-208ENST00000537981 CYP27C1Q4G0S4 372 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 CLVS2Q5SYC1 327 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 KIAA1614Q5VZ46 1190 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 BEND5Q7L4P6 421 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 EFL1Q7Z2Z2 1120 aaKnown RBP10.59□□□□□ -0.71
RTN3-208ENST00000537981 FBXO11Q86XK2 927 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 MAP4K3Q8IVH8 894 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 GPD1LQ8N335 351 aa10.59□□□□□ -0.71
RTN3-208ENST00000537981 TXNDC5Q8NBS9 432 aaKnown RBP10.59□□□□□ -0.71
RTN3-208ENST00000537981 RXFP2Q8WXD0 754 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms