RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 UGT1A9O60656 530 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 KCNJ13O60928 360 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 AP2A1O95782 977 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 ITGA2BP08514 1039 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 UGT1A6P19224 532 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 UGT1A1P22309 533 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 UGT1A4P22310 534 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 CA5AP35218 305 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 UGT1A3P35503 534 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 UGT1A5P35504 534 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 ZNF140P52738 457 aaPredicted RBP16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 PCBP4P57723 403 aaKnown RBP16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 XIAPP98170 497 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 PTPRCAPQ14761 206 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 SIX1Q15475 284 aaPredicted RBP16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 WASH2PQ6VEQ5 465 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 ZNF574Q6ZN55 896 aaPredicted RBP16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 RAB11FIP2Q7L804 512 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 AVL9Q8NBF6 648 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 OR4K2Q8NGD2 314 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 ZNF398Q8TD17 642 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 TLR10Q9BXR5 811 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 ZCCHC2Q9C0B9 1178 aaKnown RBP16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 GRPEL1Q9HAV7 217 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 UGT1A7Q9HAW7 530 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 UGT1A10Q9HAW8 530 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 UGT1A8Q9HAW9 530 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 WASH6PQ9NQA3 447 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 PPP2R2CQ9Y2T4 447 aa16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 DNMT3AQ9Y6K1 912 aaPredicted RBP16.95■□□□□ 0.3
SFSWAP-205ENST00000537164 PMS2P1A4D2B8 440 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 ERI2A8K979 691 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 RRP8O43159 456 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 GPR39O43194 453 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 PRAMEF1O95521 474 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 XRCC1P18887 633 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 PSMA3P25788 255 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 RBMS1P29558 406 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 HADHAP40939 763 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 HHEXQ03014 270 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 DMPKQ09013 629 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 BIRC2Q13490 618 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 SPARCL1Q14515 664 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 INSCQ1MX18 579 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 GPRC6AQ5T6X5 926 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 AGAP9Q5VTM2 703 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 DRICH1Q6PGQ1 229 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 CRTC3Q6UUV7 619 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 ABRAXAS1Q6UWZ7 409 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 SLC9B2Q86UD5 537 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 ZNF248Q8NDW4 579 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 OR4D9Q8NGE8 314 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 GDAP1Q8TB36 358 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 SH3KBP1Q96B97 665 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 TTC25Q96NG3 672 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 UCK1Q9HA47 277 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 RDH14Q9HBH5 336 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 EPB41L5Q9HCM4 733 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 PRDM8Q9NQV8 689 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 PDP2Q9P2J9 529 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 ZKSCAN5Q9Y2L8 839 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 SSUH2Q9Y2M2 353 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 KCTD3Q9Y597 815 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 PCDHGA7Q9Y5G6 932 aa16.94■□□□□ 0.3
SFSWAP-205ENST00000537164 H7C0S8 307 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 SRP72O76094 671 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 LIMK2P53671 638 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 EPHA4P54764 986 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 UBE2IP63279 158 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 CFHR1Q03591 330 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 NFATC2Q13469 925 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 TRA2AQ13595 282 aaKnown RBP eCLIP16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 GTF2H3Q13889 308 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 CCNG2Q16589 344 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 AMZ1Q400G9 498 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 MAP9Q49MG5 647 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 LINC00523Q86TU6 105 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 FBXO39Q8N4B4 442 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 RASGEF1AQ8N9B8 481 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 OR13C4Q8NGS5 318 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 ZNF514Q96K75 400 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 NUDT22Q9BRQ3 303 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 SEMA6CQ9H3T2 930 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 STN1Q9H668 368 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 KCNK4Q9NYG8 393 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 CPNE7Q9UBL6 633 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 FKBPLQ9UIM3 349 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 ACSL6Q9UKU0 697 aa16.93■□□□□ 0.3
SFSWAP-205ENST00000537164 TRBV23OR9-2A0A075B6M9 112 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 IGHV5-10-1A0A0J9YXX1 117 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 HGSO14964 777 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 SNX2O60749 519 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 SUN1O94901 812 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 TNFSF15O95150 251 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 BRAFP15056 766 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 VCLP18206 1134 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 CSF2RBP32927 897 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 FDFT1P37268 417 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 ABCG1P45844 678 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms