RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ASTE1Q2TB18 679 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 ATP13A4Q4VNC1 1196 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 LACTB2Q53H82 288 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 ZDHHC20Q5W0Z9 365 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 C6orf15Q6UXA7 325 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 MARK2Q7KZI7 788 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 FAM26EQ8N5C1 309 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 GPR26Q8NDV2 337 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 BRSK1Q8TDC3 778 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 JPH3Q8WXH2 748 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 ZDHHC12Q96GR4 267 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 GPR87Q9BY21 358 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 TRABDQ9H4I3 376 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 PRDM8Q9NQV8 689 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 GOLGA6AQ9NYA3 693 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 SCHIP1Q9P0W5 487 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 TMEM63CQ9P1W3 806 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 SLC23A2Q9UGH3 650 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 SLC30A1Q9Y6M5 507 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 LOC285095A0A1B0GVY8 99 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 SLC25A14O95258 325 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 ASMTLO95671 621 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 JCHAINP01591 159 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 KDELR1P24390 212 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 ARHGAP25P42331 645 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 CDK18Q07002 472 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 ITKQ08881 620 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 NFATC2Q13469 925 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 SKIDA1Q1XH10 827 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 ZNF569Q5MCW4 686 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 LRRTM4Q86VH4 590 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 ZNF761Q86XN6 746 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 KCTD6Q8NC69 237 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 LPCAT1Q8NF37 534 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 OR8K5Q8NH50 307 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 UBXN4Q92575 508 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 BTBD6Q96KE9 485 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 LRFN5Q96NI6 719 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 CD180Q99467 661 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 TBC1D10AQ9BXI6 508 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 OR2AG1Q9H205 316 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 KLC4Q9NSK0 619 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 TMPRSS11EQ9UL52 423 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 PADI1Q9ULC6 663 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 POLHQ9Y253 713 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 KCNK6Q9Y257 313 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 MAN2B2Q9Y2E5 1009 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 PCDHB3Q9Y5E6 796 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 PCDHGB7Q9Y5F8 929 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 PCDHGA9Q9Y5G4 932 aaKnown RBP11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 ESPL1Q14674 2120 aa11.03□□□□□ -0.64
CLSTN3-206ENST00000535668 ABCA12Q86UK0 2595 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 MED13Q9UHV7 2174 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 MKRN2OSH3BPM6 223 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 VIPP01282 170 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 H2AFZP0C0S5 128 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 ZFXP17010 805 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 BPIP17213 487 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 CD86P42081 329 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 NR2C2P49116 596 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 GFERP55789 205 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 TAS2R40P59535 323 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 ZBTB17Q13105 803 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 SEMA5AQ13591 1074 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 PDK1Q15118 436 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 SLC18A3Q16572 532 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 TEX44Q53QW1 395 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 H2AFVQ71UI9 128 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 NT5DC3Q86UY8 548 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 HPS6Q86YV9 775 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 THAP4Q8WY91 577 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 CTRCQ99895 268 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 ULBP3Q9BZM4 244 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 SUDS3Q9H7L9 328 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 LATS2Q9NRM7 1088 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 SMOXQ9NWM0 555 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 LUC7L2Q9Y383 392 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 PRKAB1Q9Y478 270 aa11.02□□□□□ -0.65
CLSTN3-206ENST00000535668 TRBV23OR9-2A0A075B6M9 112 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 SSU72P8A0A1W2PR75 194 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 AGAP14A8MT82 685 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 KCNK1O00180 336 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 SPAG6O75602 509 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 CREG1O75629 220 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 CEACAM4O75871 244 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 CDK14O94921 469 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 NDST3O95803 873 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 GYPCP04921 128 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 PYGMP11217 842 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 ZNF28P17035 718 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 LPOP22079 712 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 IDSP22304 550 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 FECHP22830 423 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 GPR18Q14330 331 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 DEFB109BQ30KR1 87 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 TDRD12Q587J7 1177 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 KLHL35Q6PF15 583 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 PPP1R3BQ86XI6 285 aa11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 PTRH1Q86Y79 214 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-206ENST00000535668 UNC5BQ8IZJ1 945 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms