RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 BPIFA1Q9NP55 256 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 IL26Q9NPH9 171 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 C11orf16Q9NQ32 467 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 PSMC3IPQ9P2W1 217 aaPredicted RBP12.21□□□□□ -0.46
SCARB1-204ENST00000535005 FKBPLQ9UIM3 349 aa12.21□□□□□ -0.46
SCARB1-204ENST00000535005 MTO1Q9Y2Z2 717 aaKnown RBP12.21□□□□□ -0.46
SCARB1-204ENST00000535005 CCDC78A2IDD5 438 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 CCDC162PA2VCL2 907 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 GAPDHSO14556 408 aaPredicted RBP12.2□□□□□ -0.46
SCARB1-204ENST00000535005 LATO43561 262 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 TYROBPO43914 113 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 HAUS5O94927 633 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 SLC4A1P02730 911 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 C1QAP02745 245 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 PHBP35232 272 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 NUDT1P36639 197 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 ETV3P41162 512 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 NUBP1P53384 320 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 DMWDQ09019 674 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 PEX6Q13608 980 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 ZNF284Q2VY69 593 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 ZNF528Q3MIS6 628 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 TAF1BQ53T94 588 aaPredicted RBP12.2□□□□□ -0.46
SCARB1-204ENST00000535005 TMEM31Q5JXX7 168 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 SEL1L3Q68CR1 1132 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 PDPK2PQ6A1A2 396 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 SLC36A4Q6YBV0 504 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 LRRC74BQ6ZQY2 392 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 RFLNAQ6ZTI6 216 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 CADM4Q8NFZ8 388 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 RLN3Q8WXF3 142 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 NCSTNQ92542 709 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 SLC17A9Q9BYT1 436 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 ABCG8Q9H221 673 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 VPS11Q9H270 941 aa12.2□□□□□ -0.46
SCARB1-204ENST00000535005 NUMA1Q14980 2115 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 GLYATL1P3A0A0U1RQE8 302 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 TCRBV9S1A1TA0A576 114 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 AGAP14A8MT82 685 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 PRR33A8MZF0 331 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 VAPBO95292 243 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 PRAMEP78395 509 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 TMPRSS15P98073 1019 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 CSTF1Q05048 431 aaKnown RBP12.19□□□□□ -0.46
SCARB1-204ENST00000535005 SGCGQ13326 291 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 FGL2Q14314 439 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 GPR33Q49SQ1 333 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 HENMT1Q5T8I9 393 aaKnown RBP12.19□□□□□ -0.46
SCARB1-204ENST00000535005 KIAA0895LQ68EN5 471 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 TRMT10BQ6PF06 316 aaKnown RBP12.19□□□□□ -0.46
SCARB1-204ENST00000535005 TSSK4Q6SA08 328 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 AFTPHQ6ULP2 937 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 GPR150Q8NGU9 434 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 SCG3Q8WXD2 468 aaKnown RBP12.19□□□□□ -0.46
SCARB1-204ENST00000535005 ZNF75CPQ92670 426 aaPredicted RBP12.19□□□□□ -0.46
SCARB1-204ENST00000535005 GATA6Q92908 595 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 ITFG2Q969R8 447 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 PTCD3Q96EY7 689 aaKnown RBP12.19□□□□□ -0.46
SCARB1-204ENST00000535005 CERS2Q96G23 380 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 NSL1Q96IY1 281 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 SPACA7Q96KW9 195 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 LENG8Q96PV6 779 aaPredicted RBP12.19□□□□□ -0.46
SCARB1-204ENST00000535005 VPS37BQ9H9H4 285 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 C20orf96Q9NUD7 363 aaPredicted RBP12.19□□□□□ -0.46
SCARB1-204ENST00000535005 MBD1Q9UIS9 605 aaPredicted RBP12.19□□□□□ -0.46
SCARB1-204ENST00000535005 PLXND1Q9Y4D7 1925 aa12.19□□□□□ -0.46
SCARB1-204ENST00000535005 CCL22O00626 93 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 SRP72O76094 671 aaKnown RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 PSMG1O95456 288 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 GOT2P00505 430 aaKnown RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 IGHV4-34P06331 123 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 KRT15P19012 456 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 TEAD1P28347 426 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 MC4RP32245 332 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 FNTBP49356 437 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 RAP1GDS1P52306 607 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 PPP2CBP62714 309 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 PPP2CAP67775 309 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 RCN2Q14257 317 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 NEPROQ6NW34 567 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 OTOAQ7RTW8 1153 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 TRAM1L1Q8N609 369 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 FRMD1Q8N878 549 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 DENND6BQ8NEG7 585 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 OR6P1Q8NGX9 317 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 OR4L1Q8NH43 312 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 SCAMP4Q969E2 229 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 AP2M1Q96CW1 435 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 NUS1Q96E22 293 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 GBP5Q96PP8 586 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 PAIP2Q9BPZ3 127 aaKnown RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 ZSCAN5AQ9BUG6 496 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 GPR174Q9BXC1 333 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 C1QTNF7Q9BXJ2 289 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 TRIM55Q9BYV6 548 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 C6orf106Q9H6K1 298 aaPredicted RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 SUDS3Q9H7L9 328 aaPredicted RBP12.18□□□□□ -0.46
SCARB1-204ENST00000535005 TBK1Q9UHD2 729 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 DMTF1Q9Y222 760 aa12.18□□□□□ -0.46
SCARB1-204ENST00000535005 COQ6Q9Y2Z9 468 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms