RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	ANKMY1	Q9P2S6	941 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	TBC1D29	Q9UFV1	150 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	ZNHIT2	Q9UHR6	403 aa		11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.42	□□□□□ -0.58
CTNND1-238	ENST00000534647	TRBV23OR9-2	A0A075B6M9	112 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	LILRA5	A6NI73	299 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	TOX3	O15405	576 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	NDUFA10	O95299	355 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	C9	P02748	559 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	SERPING1	P05155	500 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	F3	P13726	295 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	CA4	P22748	312 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	CCNC	P24863	283 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	GARS	P41250	739 aa	Known RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	MMP16	P51512	607 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	EPHB1	P54762	984 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	SLC25A11	Q02978	314 aa	Known RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	KLHL30	Q0D2K2	578 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	GALNT2	Q10471	571 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	CDC20	Q12834	499 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	PAFAH1B3	Q15102	231 aa	Known RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	SPA17	Q15506	151 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	SKIDA1	Q1XH10	827 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	HENMT1	Q5T8I9	393 aa	Known RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	TXNRD3NB	Q6F5E7	133 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	TIGD7	Q6NT04	549 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	MARK2	Q7KZI7	788 aa	Known RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	CHST15	Q7LFX5	561 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	TRIM74	Q86UV6	250 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	ZNF761	Q86XN6	746 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	PLXDC1	Q8IUK5	500 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	NCSTN	Q92542	709 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	ABHD17A	Q96GS6	310 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	CHP1	Q99653	195 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	CARD9	Q9H257	536 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	LUC7L	Q9NQ29	371 aa	Known RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	SIDT1	Q9NXL6	827 aa	Known RBP	11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	IP6K2	Q9UHH9	426 aa		11.41	□□□□□ -0.58
CTNND1-238	ENST00000534647	MN1	Q10571	1320 aa	Predicted RBP	11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647		A8MU76	341 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	GPR89A	B7ZAQ6	455 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	POLR1C	O15160	346 aa	Predicted RBP	11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	INPP4B	O15327	924 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	AKR1B10	O60218	316 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	NUAK1	O60285	661 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	STK17B	O94768	372 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	CLDN7	O95471	211 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	ASMTL	O95671	621 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	ATP1A1	P05023	1023 aa	Known RBP	11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	GPR89B	P0CG08	455 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	XRCC1	P18887	633 aa	Predicted RBP	11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	STAT5A	P42229	794 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	SPINT3	P49223	89 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	ARSE	P51690	589 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	ITK	Q08881	620 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	IFI16	Q16666	785 aa	Known RBP	11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	KIAA1328	Q86T90	577 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	REXO1L1P	Q8IX06	675 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	ESX1	Q8N693	406 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	ACRBP	Q8NEB7	543 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	SMIM14	Q96QK8	99 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	CTRC	Q99895	268 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	FAM83D	Q9H4H8	585 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	APMAP	Q9HDC9	416 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	RBM22	Q9NW64	420 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	MYO1A	Q9UBC5	1043 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	CPNE7	Q9UBL6	633 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	CHKB	Q9Y259	395 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	KCTD3	Q9Y597	815 aa		11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	BZW2	Q9Y6E2	419 aa	Known RBP	11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	OAS3	Q9Y6K5	1087 aa	Known RBP	11.4	□□□□□ -0.58
CTNND1-238	ENST00000534647	SSU72P8	A0A1W2PR75	194 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	FADS2P1	A8MWK0	482 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	ANKRD66	B4E2M5	251 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	GRID2	O43424	1007 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	GP1BB	P13224	206 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	TCN2	P20062	427 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	OAS2	P29728	719 aa	Known RBP	11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	CD97	P48960	835 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	UBE2I	P63279	158 aa	Known RBP	11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	DSC2	Q02487	901 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	NIPAL4	Q0D2K0	466 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	NFATC2	Q13469	925 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	SEPT6	Q14141	434 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	IL11RA	Q14626	422 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	ANKRD20A8P	Q5CZ79	823 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	SNAP47	Q5SQN1	464 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	CCDC122	Q5T0U0	273 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	HGSNAT	Q68CP4	663 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	KIF18A	Q8NI77	898 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	CCHCR1	Q8TD31	782 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	STARD8	Q92502	1023 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	C9orf72	Q96LT7	481 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	PCDH9	Q9HC56	1237 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	KCNMB2	Q9Y691	235 aa		11.39	□□□□□ -0.59
CTNND1-238	ENST00000534647	C1orf232	A0A0U1RR37	186 aa		11.38	□□□□□ -0.59

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