RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 UMODL1-AS1Q8N2C9 162 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 SLC43A3Q8NBI5 491 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 PPP1R2P1Q96PQ5 205 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 BPIFA1Q9NP55 256 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 PCDHA9Q9Y5H5 950 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 OAS3Q9Y6K5 1087 aaKnown RBP19.17■□□□□ 0.66
CAPN1-226ENST00000533820 SCN4AP35499 1836 aa19.17■□□□□ 0.66
CAPN1-226ENST00000533820 A6NL46 340 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 C1RP00736 705 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 NR4A1P22736 598 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 RPS9P46781 194 aaKnown RBP19.16■□□□□ 0.66
CAPN1-226ENST00000533820 ATP4BP51164 291 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 MTPNP58546 118 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 LCP2Q13094 533 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 ATP6AP1Q15904 470 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 AARS2Q5JTZ9 985 aaKnown RBP19.16■□□□□ 0.66
CAPN1-226ENST00000533820 INTS11Q5TA45 600 aaKnown RBP19.16■□□□□ 0.66
CAPN1-226ENST00000533820 ANKS6Q68DC2 871 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 TAF2Q6P1X5 1199 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 ELMSAN1Q6PJG2 1045 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 CROCCP3Q8IVE0 287 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 MFSD2AQ8NA29 543 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 ANAPC2Q9UJX6 822 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 GPR45Q9Y5Y3 372 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 A0A0D9SEW6 157 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 TNK2Q07912 1038 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 MAP2K5Q13163 448 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 C10orf120Q5SQS8 335 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 FNDC5Q8NAU1 212 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 OR4K2Q8NGD2 314 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 OR2T11Q8NH01 316 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 SEPT8Q92599 483 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 SGCDQ92629 289 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 FEM1CQ96JP0 617 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 MTG1Q9BT17 334 aaPredicted RBP19.16■□□□□ 0.66
CAPN1-226ENST00000533820 TRIM62Q9BVG3 475 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 SMPD3Q9NY59 655 aaPredicted RBP19.16■□□□□ 0.66
CAPN1-226ENST00000533820 SLC27A5Q9Y2P5 690 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 H3BMQ9 156 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 OR1I1O60431 355 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 PAPSS2O95340 614 aaPredicted RBP19.16■□□□□ 0.66
CAPN1-226ENST00000533820 RHOQP17081 205 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 IST1P53990 364 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 BNIP2Q12982 314 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 PTPRNQ16849 979 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 CYBRD1Q53TN4 286 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 MSANTD2Q6P1R3 559 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 COG8Q96MW5 612 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 PARK7Q99497 189 aaKnown RBP19.16■□□□□ 0.66
CAPN1-226ENST00000533820 HGH1Q9BTY7 390 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 CHID1Q9BWS9 393 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 SIAEQ9HAT2 523 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 DKK3Q9UBP4 350 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 EIF2B4Q9UI10 523 aaKnown RBP19.16■□□□□ 0.66
CAPN1-226ENST00000533820 ZNF225Q9UK10 706 aa19.16■□□□□ 0.66
CAPN1-226ENST00000533820 A8MU76 341 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 OR4F21O95013 312 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 LDLRP01130 860 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 S100BP04271 92 aaPredicted RBP19.15■□□□□ 0.66
CAPN1-226ENST00000533820 CDH3P22223 829 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 NUP107P57740 925 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 C18orf21Q32NC0 220 aaPredicted RBP19.15■□□□□ 0.66
CAPN1-226ENST00000533820 NANOGP8Q6NSW7 305 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 ABRAXAS1Q6UWZ7 409 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 TNIP2Q8NFZ5 429 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 BIRC7Q96CA5 298 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 AARSD1Q9BTE6 412 aaKnown RBP19.15■□□□□ 0.66
CAPN1-226ENST00000533820 KATNAL1Q9BW62 490 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 NANOGQ9H9S0 305 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 A0A1W2PP18 115 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 SLC12A8A0AV02 714 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 SNX2O60749 519 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 NIPSNAP2O75323 286 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 RPP40O75818 363 aaKnown RBP19.15■□□□□ 0.66
CAPN1-226ENST00000533820 RASAL1O95294 804 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 FGF4P08620 206 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 IL12AP29459 219 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 RFC2P35250 354 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 DGKQP52824 942 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 TMTC4Q5T4D3 741 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 PRMT9Q6P2P2 845 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 SIDT2Q8NBJ9 832 aaKnown RBP19.15■□□□□ 0.66
CAPN1-226ENST00000533820 STAG3L4Q8TBR4 150 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 CDKN2AIPNLQ96HQ2 116 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 MUS81Q96NY9 551 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 SH3GL1Q99961 368 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 ADNPQ9H2P0 1102 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 COMMD10Q9Y6G5 202 aa19.15■□□□□ 0.66
CAPN1-226ENST00000533820 IQCF5A8MTL0 148 aa19.14■□□□□ 0.66
CAPN1-226ENST00000533820 J3QRK9 145 aa19.14■□□□□ 0.66
CAPN1-226ENST00000533820 SYNCRIPO60506 623 aaKnown RBP19.14■□□□□ 0.66
CAPN1-226ENST00000533820 KATNA1O75449 491 aa19.14■□□□□ 0.66
CAPN1-226ENST00000533820 SLC22A3O75751 556 aa19.14■□□□□ 0.66
CAPN1-226ENST00000533820 ZNF182P17025 639 aaPredicted RBP19.14■□□□□ 0.66
CAPN1-226ENST00000533820 POLR2IP36954 125 aaKnown RBP19.14■□□□□ 0.66
CAPN1-226ENST00000533820 USP50Q70EL3 339 aaPredicted RBP19.14■□□□□ 0.66
CAPN1-226ENST00000533820 ZNF280BQ86YH2 543 aa19.14■□□□□ 0.66
CAPN1-226ENST00000533820 EFHBQ8N7U6 833 aa19.14■□□□□ 0.66
CAPN1-226ENST00000533820 PDZD8Q8NEN9 1154 aa19.14■□□□□ 0.66
CAPN1-226ENST00000533820 OR52B6Q8NGF0 335 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms