RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 MAGEA12P43365 314 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 PTSQ03393 145 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 GABPB1Q06547 395 aaPredicted RBP10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 CNTN1Q12860 1018 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 ITIH4Q14624 930 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 ANGPT1Q15389 498 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 DBN1Q16643 649 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 FAM83EQ2M2I3 478 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 CYP2U1Q7Z449 544 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 TSPAN33Q86UF1 283 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 LONP2Q86WA8 852 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 TRIM42Q8IWZ5 723 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 ZNF398Q8TD17 642 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 SERAC1Q96JX3 654 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 SPACA7Q96KW9 195 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 C1QTNF7Q9BXJ2 289 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 TPSD1Q9BZJ3 242 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 SLC13A1Q9BZW2 595 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 VPS11Q9H270 941 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 FAM83DQ9H4H8 585 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 SYTL2Q9HCH5 934 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 IL26Q9NPH9 171 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 PSD3Q9NYI0 1048 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 SLC17A6Q9P2U8 582 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 GNPTGQ9UJJ9 305 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 VWA7Q9Y334 891 aa10.84□□□□□ -0.67
CCDC90B-218ENST00000533761 CCDC189A1A4V9 331 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 HMX2A2RU54 273 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 OR51F1A6NGY5 319 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 A8MX80 341 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 PRMT5O14744 637 aaPredicted RBP10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 SPAG7O75391 227 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 VPS26AO75436 327 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 NEFHP12036 1026 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 TDGF1P13385 188 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 SAT1P21673 171 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 CD9P21926 228 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 LHCGRP22888 699 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 ACRV1P26436 265 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 P2RY2P41231 377 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 NSG1P42857 185 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 METAP1P53582 386 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 XIAPP98170 497 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 PEX6Q13608 980 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 PTPRCAPQ14761 206 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 ACOX1Q15067 660 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 ZKSCAN8Q15776 578 aaPredicted RBP10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 SETMARQ53H47 684 aaPredicted RBP10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 AGAP9Q5VTM2 703 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 ZNF765Q7L2R6 523 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 TRAM1L1Q8N609 369 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 CCDC63Q8NA47 563 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 OR14C36Q8NHC7 312 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 TCP10LQ8TDR4 215 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 LPGAT1Q92604 370 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 KCNJ9Q92806 393 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 FAM131CQ96AQ9 280 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 ARRDC3Q96B67 414 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 DCUN1D1Q96GG9 259 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 COPS8Q99627 209 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 PAIP2Q9BPZ3 127 aaKnown RBP10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 SPATA16Q9BXB7 569 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 ZCCHC2Q9C0B9 1178 aaKnown RBP10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 BTBD1Q9H0C5 482 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 KDM4CQ9H3R0 1056 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 SGK2Q9HBY8 427 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 SMOXQ9NWM0 555 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 MARCH4Q9P2E8 410 aaPredicted RBP10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 CYP8B1Q9UNU6 501 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 CRYL1Q9Y2S2 319 aa10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 MTO1Q9Y2Z2 717 aaKnown RBP10.83□□□□□ -0.68
CCDC90B-218ENST00000533761 LRRC72A6NJI9 287 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 AREL1O15033 823 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 LZTS3O60299 673 aaPredicted RBP10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 C2P06681 752 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 RPS3P23396 243 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 CD6P30203 668 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 CNR2P34972 360 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 RPA3P35244 121 aaPredicted RBP10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 FNTBP49356 437 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 LIG3P49916 1009 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 GNGT1P63211 74 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 PDE1CQ14123 709 aaPredicted RBP10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 MAP7D1Q3KQU3 841 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 PIP5KL1Q5T9C9 394 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 HECTD2Q5U5R9 776 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 AGBL4Q5VU57 503 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 PTRHD1Q6GMV3 140 aaKnown RBP10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 CNSTQ6PJW8 725 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 LIPIQ6XZB0 460 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 FAM124AQ86V42 546 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 C11orf74Q86VG3 221 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 WDR5BQ86VZ2 330 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 SERPINA9Q86WD7 417 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 NXPE1Q8N323 547 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 FAM174AQ8TBP5 190 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 RDH11Q8TC12 318 aa10.82□□□□□ -0.68
CCDC90B-218ENST00000533761 MGARPQ8TDB4 240 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms