RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 BCAS1O75363 584 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 IL18RAPO95256 599 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CXCL14O95715 111 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 IFNA14P01570 189 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 MPOP05164 745 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CA3P07451 260 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 PIM1P11309 404 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 TIE1P35590 1138 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CPOXP36551 454 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CUL2Q13617 745 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CEACAM7Q14002 265 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 GOLGA7BQ2TAP0 167 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF284Q2VY69 593 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 BTBD16Q32M84 506 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 LRRC38Q5VT99 294 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 SPESP1Q6UW49 350 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 STRA8Q7Z7C7 330 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CARM1Q86X55 608 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CACUL1Q86Y37 369 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF781Q8N8C0 355 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 GALNT11Q8NCW6 608 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 LSM14AQ8ND56 463 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 PIK3C3Q8NEB9 887 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ITFG1Q8TB96 612 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 HDAC10Q969S8 669 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 TSEN34Q9BSV6 310 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 FUNDC2Q9BWH2 189 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 GON7Q9BXV9 100 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 SAV1Q9H4B6 383 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 OLAHQ9NV23 265 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 MSRAQ9UJ68 235 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 MKLN1Q9UL63 735 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 RUVBL2Q9Y230 463 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 GRIP1Q9Y3R0 1128 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 TIMM22Q9Y584 194 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 hCG_1818297A0A087WSY0 165 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 TYW5A2RUC4 315 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 DFFAO00273 331 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ENPP3O14638 875 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 PGLSO95336 258 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ANGPTL1O95841 491 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 GJA1P17302 382 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 IMPDH1P20839 514 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 MPSTP25325 297 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 LMO2P25791 158 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 PTPN9P43378 593 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 DUSP4Q13115 394 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 DSC3Q14574 896 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 PDK2Q15119 407 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CRY1Q16526 586 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 INSCQ1MX18 579 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 TMEM236Q5W0B7 351 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 FAM45BPQ6NSW5 357 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 DRICH1Q6PGQ1 229 aaPredicted RBP6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 KIF18BQ86Y91 864 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ANKK1Q8NFD2 765 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 MCOLN3Q8TDD5 553 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 SHC3Q92529 594 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF558Q96NG5 402 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC29A1Q99808 456 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 MRPL45Q9BRJ2 306 aaKnown RBP6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 UGT2B28Q9BY64 529 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 HOXD1Q9GZZ0 328 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 MMP27Q9H306 513 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 FZD8Q9H461 694 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 SERHL2Q9H4I8 314 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 RIBC2Q9H4K1 309 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CAB39LQ9H9S4 337 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 FANCFQ9NPI8 374 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 RDH8Q9NYR8 311 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 PLCL2Q9UPR0 1127 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 RNF11Q9Y3C5 154 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 Q9Y3F1 56 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 CUL9Q8IWT3 2517 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 PAPPA2Q9BXP8 1791 aa6.74□□□□□ -1.33
TGFBR3-209ENST00000532540 ATP6AP2A0A1C7CYW4 349 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 AQP12BA6NM10 295 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 SULT1B1O43704 296 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 DNAJB5O75953 348 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 FADS2O95864 444 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ITGB1P05556 798 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CCNYL3P0C7X3 344 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 MMP8P22894 467 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CES1P23141 567 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 AZGP1P25311 298 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 GTF2E2P29084 291 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 HOXA11P31270 313 aaPredicted RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF45Q02386 682 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CHRNEQ04844 493 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 SELPLGQ14242 412 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CAPRIN1Q14444 709 aaKnown RBP6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 STARD3Q14849 445 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 CDK10Q15131 360 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 SV2CQ496J9 727 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC9B1Q4ZJI4 515 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 SLX4IPQ5VYV7 408 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 BTN2A1Q7KYR7 527 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 SCUBE3Q8IX30 993 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 AQP12AQ8IXF9 295 aa6.73□□□□□ -1.33
TGFBR3-209ENST00000532540 NETO2Q8NC67 525 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms