RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 SIX5Q8N196 739 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 SPATA6LQ8N4H0 392 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 RP9Q8TA86 221 aaKnown RBP11.21□□□□□ -0.62
PTPRK-221ENST00000532331 NUSAP1Q9BXS6 441 aaKnown RBP11.21□□□□□ -0.62
PTPRK-221ENST00000532331 C3orf14Q9HBI5 128 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 SPAG4Q9NPE6 437 aa11.21□□□□□ -0.62
PTPRK-221ENST00000532331 DDX3YO15523 660 aaKnown RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 ATXN1P54253 815 aaKnown RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 JAM2P57087 298 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 PSME3P61289 254 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 NEK10Q6ZWH5 1172 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 OR8H2Q8N162 312 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 HLA-CQ95604 372 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 RAD51AP1Q96B01 352 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 PCBD2Q9H0N5 130 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 WDR6Q9NNW5 1121 aaKnown RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 NUP188Q5SRE5 1749 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 SMIM31A0A1B0GVY4 71 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 RFPL2O75678 378 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 CSTF2P33240 577 aaKnown RBP eCLIP11.2□□□□□ -0.625e-7■■■■□ 20.9
PTPRK-221ENST00000532331 NSG1P42857 185 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 SLC35G1Q2M3R5 365 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 MYLK3Q32MK0 819 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 HECTD2Q5U5R9 776 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 TRAF7Q6Q0C0 670 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 GPR180Q86V85 440 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 MCEMP1Q8IX19 187 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 ZNF567Q8N184 647 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 SLITRK2Q9H156 845 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 SPHK2Q9NRA0 654 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 FKBPLQ9UIM3 349 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 BUD31P41223 144 aaPredicted RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 TAS2R50P59544 299 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 SRSF11Q05519 484 aaKnown RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 GCNT7Q6ZNI0 430 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 CAMK1DQ8IU85 385 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 C10orf107Q8IVU9 208 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 SUN3Q8TAQ9 357 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 PTCD3Q96EY7 689 aaKnown RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 ZFRQ96KR1 1074 aaKnown RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 REXO2Q9Y3B8 237 aaKnown RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 TCAF1Q9Y4C2 921 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 PIAS3Q9Y6X2 628 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 GLI3P10071 1580 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 PMM2O15305 246 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 PSMG1O95456 288 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 HLA-EP13747 358 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 ITGA2P17301 1181 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 VIPR1P32241 457 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 CCNFP41002 786 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 CDKN2BP42772 138 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 SEMG2Q02383 582 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 CCINQ13939 588 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 SCIMPQ6UWF3 145 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 DPYSL5Q9BPU6 564 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 BTAF1O14981 1849 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 C4AP0C0L4 1744 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 TGM5O43548 720 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 BCL10O95999 233 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 DLDP09622 509 aaKnown RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 NR2F1P10589 423 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 TNK2Q07912 1038 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 TAF13Q15543 124 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 EIF3MQ7L2H7 374 aaKnown RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 NET1Q7Z628 596 aaPredicted RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 DNAJB14Q8TBM8 379 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 NMD3Q96D46 503 aaKnown RBP11.2□□□□□ -0.62
PTPRK-221ENST00000532331 SMOQ99835 787 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 TRMOQ9BU70 441 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 ADAM7Q9H2U9 754 aa11.2□□□□□ -0.62
PTPRK-221ENST00000532331 MYH2Q9UKX2 1941 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 GRIN2DO15399 1336 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 TSPAN19P0C672 248 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 HNRNPLP14866 589 aaKnown RBP eCLIP11.19□□□□□ -0.621e-6■■■□□ 17.5
PTPRK-221ENST00000532331 IDO1P14902 403 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 GRIA3P42263 894 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 SMIM11AP58511 58 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 SLC25A3Q00325 362 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 ANXA8L1Q5VT79 327 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 TRIM40Q6P9F5 258 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 TMEM110Q86TL2 294 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 SLC22A18Q96BI1 424 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 BTBD9Q96Q07 612 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 STRADBQ9C0K7 418 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 POLR3BQ9NW08 1133 aaPredicted RBP11.19□□□□□ -0.62
PTPRK-221ENST00000532331 UPK3BL1B0FP48 263 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 UPK3BL2E5RIL1 263 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 PTGES3LE9PB15 166 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 TRAFD1O14545 582 aaPredicted RBP11.19□□□□□ -0.62
PTPRK-221ENST00000532331 SNAP91O60641 907 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 ITGBL1O95965 494 aaPredicted RBP11.19□□□□□ -0.62
PTPRK-221ENST00000532331 MT-CYBP00156 380 aaPredicted RBP11.19□□□□□ -0.62
PTPRK-221ENST00000532331 PRKCGP05129 697 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 SERPINA6P08185 405 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 LINC00032P0C843 101 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 GRIA2P42262 883 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 TMED10P49755 219 aaKnown RBP11.19□□□□□ -0.62
PTPRK-221ENST00000532331 MS4A13Q5J8X5 152 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 OR52L1Q8NGH7 329 aa11.19□□□□□ -0.62
PTPRK-221ENST00000532331 PYDC1Q8WXC3 89 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms