RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 HPS4Q9NQG7 708 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 SCN3BQ9NY72 215 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 MAGED1Q9Y5V3 778 aaPredicted RBP11.24□□□□□ -0.61
NXF1-211ENST00000531709 NDST3O95803 873 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 UROSP10746 265 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 GPX3P22352 226 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 HSPA7P48741 367 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 MS4A13Q5J8X5 152 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 PAGE3Q5JUK9 113 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 MSANTD2Q6P1R3 559 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 CRTC3Q6UUV7 619 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 SPATA19Q7Z5L4 167 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 ANKRD46Q86W74 232 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 HORMAD1Q86X24 394 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 ZC3H7AQ8IWR0 971 aaKnown RBP11.24□□□□□ -0.61
NXF1-211ENST00000531709 ATG16L2Q8NAA4 619 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 EEF1AKMT1Q8WVE0 214 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 RORBQ92753 470 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 DACH2Q96NX9 599 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 NAA50Q9GZZ1 169 aaKnown RBP11.24□□□□□ -0.61
NXF1-211ENST00000531709 KLHL25Q9H0H3 589 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 SMURF2Q9HAU4 748 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 NMRK2Q9NPI5 230 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 SH3GLB1Q9Y371 365 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 RBBP6Q7Z6E9 1792 aaKnown RBP11.23□□□□□ -0.61
NXF1-211ENST00000531709 OR1I1O60431 355 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 BMP2P12643 396 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 AKR1A1P14550 325 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 LPOP22079 712 aaPredicted RBP11.23□□□□□ -0.61
NXF1-211ENST00000531709 PGFP49763 221 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 RHOAP61586 193 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 UPP1Q16831 310 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 TBC1D25Q3MII6 688 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 AFTPHQ6ULP2 937 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 THAP5Q7Z6K1 395 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 ZCCHC7Q8N3Z6 543 aaKnown RBP11.23□□□□□ -0.61
NXF1-211ENST00000531709 TMEM151AQ8N4L1 468 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 ANKFN1Q8N957 763 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 IGSF8Q969P0 613 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 SLCO4A1Q96BD0 722 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 PGAP3Q96FM1 320 aaPredicted RBP11.23□□□□□ -0.61
NXF1-211ENST00000531709 FEM1CQ96JP0 617 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 SMIM14Q96QK8 99 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 TRIM54Q9BYV2 358 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 CIDEBQ9UHD4 219 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 EVLQ9UI08 416 aaPredicted RBP11.23□□□□□ -0.61
NXF1-211ENST00000531709 A0A0D9SEW6 157 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 EVPLLA8MZ36 301 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 TRIM24O15164 1050 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 CPSF4O95639 269 aaKnown RBP11.23□□□□□ -0.61
NXF1-211ENST00000531709 C1RP00736 705 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 FTH1P02794 183 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 DNAJB1P25685 340 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 ZNF157P51786 506 aaPredicted RBP11.23□□□□□ -0.61
NXF1-211ENST00000531709 ZNF33AQ06730 810 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 FAM151BQ6UXP7 276 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 CARM1Q86X55 608 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 CNTN4Q8IWV2 1026 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 SNX19Q92543 992 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 COX4I2Q96KJ9 171 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 IPPKQ9H8X2 491 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 MAGEL2Q9UJ55 1249 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 PADI4Q9UM07 663 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 TBC1D30Q9Y2I9 924 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 TSC22D4Q9Y3Q8 395 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 COL11A1P12107 1806 aaPredicted RBP11.23□□□□□ -0.61
NXF1-211ENST00000531709 RAD51BO15315 384 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 ULK1O75385 1050 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 G6PDP11413 515 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 SERPINB10P48595 397 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 OR4D2P58180 307 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 RPS24P62847 133 aaKnown RBP11.23□□□□□ -0.61
NXF1-211ENST00000531709 HMGCS1Q01581 520 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 CREB5Q02930 508 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 DUSP4Q13115 394 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 FAM110CQ1W6H9 321 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 FAM174BQ3ZCQ3 159 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 ANKDD1AQ495B1 522 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 PROSER1Q86XN7 944 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 ZUFSPQ96AP4 578 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 OR52E6Q96RD3 313 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 LRRC3Q9BY71 257 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 TFB2MQ9H5Q4 396 aaKnown RBP11.23□□□□□ -0.61
NXF1-211ENST00000531709 MAP10Q9P2G4 905 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 OPTCQ9UBM4 332 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 COQ6Q9Y2Z9 468 aa11.23□□□□□ -0.61
NXF1-211ENST00000531709 ANKRD33BA6NCL7 494 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 TARM1B6A8C7 271 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 CBFA2T3O75081 653 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 TTPAP49638 278 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 CBX3Q13185 183 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 LAPTM4AQ15012 233 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 PLA2G4EQ3MJ16 856 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 MFSD14CQ5VZR4 134 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 TMEM207Q6UWW9 146 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 MAMDC4Q6UXC1 1216 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 P3H2Q8IVL5 708 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 PELI3Q8N2H9 469 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 OR7A2PQ8NGA2 310 aa11.22□□□□□ -0.61
NXF1-211ENST00000531709 FNDC8Q8TC99 324 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms