RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 RMDN2Q96LZ7 410 aa6.32□□□□□ -1.4
CAPRIN1-208ENST00000530008 LRRC3BQ96PB8 259 aa6.32□□□□□ -1.4
CAPRIN1-208ENST00000530008 TMEM79Q9BSE2 394 aa6.32□□□□□ -1.4
CAPRIN1-208ENST00000530008 FAM234AQ9H0X4 552 aa6.32□□□□□ -1.4
CAPRIN1-208ENST00000530008 PCED1AQ9H1Q7 454 aa6.32□□□□□ -1.4
CAPRIN1-208ENST00000530008 ADPRHL2Q9NX46 363 aa6.32□□□□□ -1.4
CAPRIN1-208ENST00000530008 PCDHA12Q9UN75 941 aa6.32□□□□□ -1.4
CAPRIN1-208ENST00000530008 B3GALT5Q9Y2C3 310 aa6.32□□□□□ -1.4
CAPRIN1-208ENST00000530008 ASTN2O75129 1339 aaPredicted RBP6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 TRIM77I1YAP6 450 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 ZIC3O60481 467 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 MT-ND3P03897 115 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 STMN1P16949 149 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 GABRA5P31644 462 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 APOBEC1P41238 236 aaKnown RBP6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 RASSF2P50749 326 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 ZNF75DP51815 510 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 LIMK1P53667 647 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 HNRNPKP61978 463 aaKnown RBP eCLIP6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 FOXM1Q08050 763 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 MTX1Q13505 466 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 MELKQ14680 651 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 MORF4L2Q15014 288 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 EFNB3Q15768 340 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 DECR1Q16698 335 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 SYT16Q17RD7 645 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 SMU1Q2TAY7 513 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 ZDHHC20Q5W0Z9 365 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 KCTD18Q6PI47 426 aaPredicted RBP6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 FAM198BQ6UWH4 519 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 PARM1Q6UWI2 310 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 SLC36A4Q6YBV0 504 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 ZBTB49Q6ZSB9 765 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 ABI3BPQ7Z7G0 1075 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 NRROSQ86YC3 692 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 FOXRED2Q8IWF2 684 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 NDUFAF2Q8N183 169 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 ATAD1Q8NBU5 361 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 EXD1Q8NHP7 514 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 CTCFLQ8NI51 663 aaPredicted RBP6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 ROBO4Q8WZ75 1007 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 EXT2Q93063 718 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 SPSB1Q96BD6 273 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 APOLD1Q96LR9 279 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 SEMA3CQ99985 751 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 NRIP3Q9NQ35 241 aa6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 SIRT3Q9NTG7 399 aaPredicted RBP6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.31□□□□□ -1.4
CAPRIN1-208ENST00000530008 J3QR06 171 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 ADAM10O14672 748 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 HS3ST1O14792 307 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 TIMM23O14925 209 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 ZNF263O14978 683 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 HTATSF1O43719 755 aaKnown RBP6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 CAMTA2O94983 1202 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 VNN2O95498 520 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 THEGLP0DJG4 465 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 ADRA2CP18825 462 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 BDKRB2P30411 391 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 FASLGP48023 281 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 SNRPEP62304 92 aaKnown RBP6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 CTTNQ14247 550 aaKnown RBP6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 GLRA4Q5JXX5 417 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 RNASEH2BQ5TBB1 312 aaKnown RBP6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 SFMBT2Q5VUG0 894 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 DCAF12L2Q5VW00 463 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 FIGLAQ6QHK4 219 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 MOXD1Q6UVY6 613 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 DET1Q7L5Y6 550 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 PTF1AQ7RTS3 328 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 DSG4Q86SJ6 1040 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 HOOK3Q86VS8 718 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 CNGA4Q8IV77 575 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 SYCP3Q8IZU3 236 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 AADATQ8N5Z0 425 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 PCDH20Q8N6Y1 951 aaKnown RBP6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 EMC1Q8N766 993 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 SLC38A9Q8NBW4 561 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 GRAPLQ8TC17 118 aaPredicted RBP6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 KRT35Q92764 455 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 DPF1Q92782 380 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 INPP5DQ92835 1189 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 TAAR8Q969N4 342 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 EXOC4Q96A65 974 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 ERLEC1Q96DZ1 483 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 CABS1Q96KC9 395 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 QTRT1Q9BXR0 403 aaKnown RBP6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 FZD8Q9H461 694 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 ARMCX3Q9UH62 379 aaPredicted RBP6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 PAM16Q9Y3D7 125 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 HS3ST3A1Q9Y663 406 aa6.3□□□□□ -1.4
CAPRIN1-208ENST00000530008 GTPBP10A4D1E9 387 aaKnown RBP6.29□□□□□ -1.4
CAPRIN1-208ENST00000530008 FAM90A26D6RGX4 464 aa6.29□□□□□ -1.4
CAPRIN1-208ENST00000530008 MS4A18H0YCH9 400 aa6.29□□□□□ -1.4
CAPRIN1-208ENST00000530008 TMEM189-UBE2V1I3L0A0 370 aa6.29□□□□□ -1.4
CAPRIN1-208ENST00000530008 MATN3O15232 486 aa6.29□□□□□ -1.4
CAPRIN1-208ENST00000530008 ITM2AO43736 263 aa6.29□□□□□ -1.4
CAPRIN1-208ENST00000530008 SSX4O60224 188 aa6.29□□□□□ -1.4
CAPRIN1-208ENST00000530008 FAM58BPP0C7Q3 252 aa6.29□□□□□ -1.4
CAPRIN1-208ENST00000530008 CYP19A1P11511 503 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms