RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 ATXN3P54252 364 aaPredicted RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 TRA2AQ13595 282 aaKnown RBP eCLIP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 PDK1Q15118 436 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 RABEP1Q15276 862 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 INAQ16352 499 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 UGCGQ16739 394 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 CDO1Q16878 200 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 WSCD2Q2TBF2 565 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 FAM153CQ494X1 144 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ANKDD1AQ495B1 522 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 AARDQ4LEZ3 155 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ALG10Q5BKT4 473 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 MDH1BQ5I0G3 518 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ALG10BQ5I7T1 473 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 EARS2Q5JPH6 523 aaKnown RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ENTPD8Q5MY95 495 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 TTC39AQ5SRH9 613 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 RNASEH2BQ5TBB1 312 aaKnown RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 GGNBP1Q5YKI7 109 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 NSUN5P2Q63ZY6 315 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ETFRF1Q6IPR1 90 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 METTL2BQ6P1Q9 378 aaKnown RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 TMEM182Q6ZP80 229 aaPredicted RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 RNF207Q6ZRF8 634 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 TRILQ7L0X0 811 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 IRF2BP2Q7Z5L9 587 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 CCDC190Q86UF4 302 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 RBFAQ8N0V3 343 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 LCORLQ8N3X6 602 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 SLC25A41Q8N5S1 370 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ZNF540Q8NDQ6 660 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 AGBL3Q8NEM8 1001 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 LPCAT1Q8NF37 534 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 OR1J2Q8NGS2 313 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 WDR20Q8TBZ3 569 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ST7LQ8TDW4 575 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ACTRT2Q8TDY3 377 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 N4BP2L2Q92802 583 aaPredicted RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 BCL2L2Q92843 193 aaPredicted RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 EXTL1Q92935 676 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ST6GALNAC6Q969X2 333 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 RBM18Q96H35 190 aaKnown RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 METTL2AQ96IZ6 378 aaKnown RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ZNF333Q96JL9 665 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 PDLIM2Q96JY6 352 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 MUS81Q96NY9 551 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 RUFY1Q96T51 708 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ESRP2Q9H6T0 727 aaKnown RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 MINDY3Q9H8M7 445 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 CYSLTR2Q9NS75 346 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 RNF146Q9NTX7 359 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ZBTB40Q9NUA8 1239 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 ACSS1Q9NUB1 689 aaPredicted RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 CISD1Q9NZ45 108 aaKnown RBP3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 TCAF1Q9Y4C2 921 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 TRIM17Q9Y577 477 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 SLC4A4Q9Y6R1 1079 aa3.51□□□□□ -1.85
AMBRA1-208ENST00000529558 CECR2Q9BXF3 1484 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 RHODO00212 210 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 CLDN4O14493 209 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 PLPP2O43688 288 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 SELENOFO60613 162 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 MED24O75448 989 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 NDUFB4O95168 129 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 ESRRBO95718 433 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 SLC16A8O95907 504 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 ALPPP05187 535 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 HEXBP07686 556 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 MMP3P08254 477 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 CYC1P08574 325 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 MYZAPP0CAP1 466 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 HKR1P10072 659 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 ALPPL2P10696 532 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 VCLP18206 1134 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 MAOAP21397 527 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 KCNA5P22460 613 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 ITGB8P26012 769 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 HOXD9P28356 352 aaPredicted RBP3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 GABRA5P31644 462 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 ADRA1BP35368 520 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 FRKP42685 505 aaPredicted RBP3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 RABIFP47224 123 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 COMPP49747 757 aaPredicted RBP3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 GMPSP49915 693 aaPredicted RBP3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 SLC26A5P58743 744 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 POLR2LP62875 67 aaKnown RBP3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 ZNF585AQ6P3V2 769 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 KCNV1Q6PIU1 500 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 FIGLAQ6QHK4 219 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 TPRG1Q6ZUI0 275 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 MIER3Q7Z3K6 550 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 TLK2Q86UE8 772 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 SFTPA2Q8IWL1 248 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 C4orf19Q8IY42 314 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 ADGRF4Q8IZF3 695 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 RASGEF1CQ8N431 466 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 HORMAD2Q8N7B1 307 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 POU5F2Q8N7G0 328 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 LRRC57Q8N9N7 239 aa3.5□□□□□ -1.85
AMBRA1-208ENST00000529558 NEK11Q8NG66 645 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms