RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 EPHX2P34913 555 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ETV6P41212 452 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 HNF4AP41235 474 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 NT5C2P49902 561 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 SEPHS1P49903 392 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 HK3P52790 923 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 UGT2B15P54855 530 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ABCE1P61221 599 aaKnown RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 MS4A2Q01362 244 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 IL1RL1Q01638 556 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 CNTN2Q02246 1040 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 TNK2Q07912 1038 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 PLD1Q13393 1074 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 EFR3AQ14156 821 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ZNF169Q14929 603 aaPredicted RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 FASTKD3Q14CZ7 662 aaKnown RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 ZNF404Q494X3 552 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 KLHL12Q53G59 568 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 GPATCH4Q5T3I0 446 aaKnown RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 FAM109BQ6ICB4 259 aaPredicted RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 DENND5AQ6IQ26 1287 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 TIGD7Q6NT04 549 aaPredicted RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 NAPRTQ6XQN6 538 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 CFAP77Q6ZQR2 320 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ANKS3Q6ZW76 656 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 CATSPER4Q7RTX7 472 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 PAGE2Q7Z2X7 111 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 C16orf62Q7Z3J2 963 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 LUZP2Q86TE4 346 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 COMMD7Q86VX2 200 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ERO1BQ86YB8 467 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 PLD3Q8IV08 490 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 SYTL1Q8IYJ3 562 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 MPP5Q8N3R9 675 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 CBR4Q8N4T8 237 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ZNF781Q8N8C0 355 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 SMG8Q8ND04 991 aaKnown RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 C3orf58Q8NDZ4 430 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 OR4M1Q8NGD0 313 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 OR6P1Q8NGX9 317 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 OR2T3Q8NH03 318 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 MCFD2Q8NI22 146 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ZNF564Q8TBZ8 553 aaPredicted RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 PPP1R13LQ8WUF5 828 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 RAD54LQ92698 747 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 COPS5Q92905 334 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ZDHHC12Q96GR4 267 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 SLC45A3Q96JT2 553 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 SERAC1Q96JX3 654 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 TMEM68Q96MH6 324 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 CPXM1Q96SM3 734 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 PLIN2Q99541 437 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 KLF6Q99612 283 aaPredicted RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 SPATA9Q9BWV2 254 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 RAB34Q9BZG1 259 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 C2orf40Q9H1Z8 148 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 RNPEPQ9H4A4 650 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 LDAHQ9H6V9 325 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 CATSPERBQ9H7T0 1116 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 NOL11Q9H8H0 719 aaKnown RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 ACP6Q9NPH0 428 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 HPS4Q9NQG7 708 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 FBXL12Q9NXK8 326 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 COQ3Q9NZJ6 369 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 GCNT4Q9P109 453 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 EXTL2Q9UBQ6 330 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 GPN3Q9UHW5 284 aaPredicted RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 TRHDEQ9UKU6 1024 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 USP22Q9UPT9 525 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 ENTPD4Q9Y227 616 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 DRG1Q9Y295 367 aaKnown RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 NAALAD2Q9Y3Q0 740 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 DAGLAQ9Y4D2 1042 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 PCDHGB7Q9Y5F8 929 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 RGPD8O14715 1765 aaPredicted RBP5.77□□□□□ -1.49
CD44-225ENST00000527326 RGPD5Q99666 1765 aa5.77□□□□□ -1.49
CD44-225ENST00000527326 SPATA31A1Q5TZJ5 1347 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 ADGRA2Q96PE1 1338 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 DLEC1Q9Y238 1755 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 RNF103-CHMP3A0A140T963 221 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 LOC100653049A0A140TA62 436 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 CCDC195A0A1B0GUA6 201 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 MEIOCA2RUB1 952 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 AQP12BA6NM10 295 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 A8MUA0 341 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TRIM49D1C9J1S8 452 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 BTN3A3O00478 584 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 DLGAP1O14490 977 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TOR1BO14657 336 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TRIM24O15164 1050 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 DCXO43602 365 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 HS6ST1O60243 411 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 MRPS14O60783 128 aaKnown RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 KRT34O76011 436 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 FTLP02792 175 aaPredicted RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 FTH1P02794 183 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 TP53P04637 393 aaPredicted RBP5.76□□□□□ -1.49
CD44-225ENST00000527326 ALPPP05187 535 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 IGKV5-2P06315 115 aa5.76□□□□□ -1.49
CD44-225ENST00000527326 FABP1P07148 127 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms