RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PFDN6O15212 129 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 PQBP1O60828 265 aaKnown RBP17.39■□□□□ 0.37
USH1C-205ENST00000527020 TIPRLO75663 272 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 HSPA8P11142 646 aaKnown RBP17.39■□□□□ 0.37
USH1C-205ENST00000527020 CTPS1P17812 591 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 CREB5Q02930 508 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 RCAN2Q14206 197 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 RPS6KA2Q15349 733 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 AARS2Q5JTZ9 985 aaKnown RBP17.39■□□□□ 0.37
USH1C-205ENST00000527020 DCBLD1Q8N8Z6 715 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 SLAIN1Q8ND83 568 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 OR56A4Q8NGH8 313 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 TRIM8Q9BZR9 551 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 BRINP2Q9C0B6 783 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 ZNF696Q9H7X3 374 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 SARS2Q9NP81 518 aaKnown RBP17.39■□□□□ 0.37
USH1C-205ENST00000527020 ARMC1Q9NVT9 282 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 CD274Q9NZQ7 290 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 APPL1Q9UKG1 709 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 LZTS1Q9Y250 596 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 ST14Q9Y5Y6 855 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 COMMD10Q9Y6G5 202 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 K7ERQ8 282 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 GAPDHSO14556 408 aaPredicted RBP17.39■□□□□ 0.37
USH1C-205ENST00000527020 OR4F21O95013 312 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 TFAP2AP05549 437 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 ALPIP09923 528 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 MBL2P11226 248 aaPredicted RBP17.39■□□□□ 0.37
USH1C-205ENST00000527020 GSTT1P30711 240 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 RHOAP61586 193 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 SMAD3P84022 425 aaKnown RBP17.39■□□□□ 0.37
USH1C-205ENST00000527020 CACNG1Q06432 222 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 TGFBIQ15582 683 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 MAP7D1Q3KQU3 841 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 TPGS2Q68CL5 300 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 GPRIN3Q6ZVF9 776 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 OR52B6Q8NGF0 335 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.39■□□□□ 0.37
USH1C-205ENST00000527020 VPS33AQ96AX1 596 aa17.39■□□□□ 0.37
USH1C-205ENST00000527020 NOL11Q9H8H0 719 aaKnown RBP17.39■□□□□ 0.37
USH1C-205ENST00000527020 PIKFYVEQ9Y2I7 2098 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 DENND4CQ5VZ89 1909 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 A0A1W2PP18 115 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 E5RI56 91 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 SNX2O60749 519 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 OR6B1O95007 311 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 HMGCLP35914 325 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 CSKP41240 450 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 ERVPABLB-1P60509 514 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 UFM1P61960 85 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 GRIK2Q13002 908 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 C18orf21Q32NC0 220 aaPredicted RBP17.38■□□□□ 0.37
USH1C-205ENST00000527020 TSPEARQ8WU66 669 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 NAT14Q8WUY8 206 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 PIH1D2Q8WWB5 315 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 TMEM125Q96AQ2 219 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 CDK15Q96Q40 435 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 ZNF382Q96SR6 550 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 CIB1Q99828 191 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 EPB41L1Q9H4G0 881 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 MAGEE1Q9HCI5 957 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 CCM2LQ9NUG4 571 aaPredicted RBP17.38■□□□□ 0.37
USH1C-205ENST00000527020 GID8Q9NWU2 228 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 EGFL7Q9UHF1 273 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 TMCO1Q9UM00 188 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 DHRS7Q9Y394 339 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 RNF11Q9Y3C5 154 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 TNFAIP8O95379 198 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 SOD2P04179 222 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 IL12AP29459 219 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 CLCN2P51788 898 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 FOXM1Q08050 763 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 TAF12Q16514 161 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 PAGE3Q5JUK9 113 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 LCN8Q6JVE9 175 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 LETMD1Q6P1Q0 360 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 SBSNQ6UWP8 590 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 EFL1Q7Z2Z2 1120 aaKnown RBP17.38■□□□□ 0.37
USH1C-205ENST00000527020 DNAJB7Q7Z6W7 309 aaPredicted RBP17.38■□□□□ 0.37
USH1C-205ENST00000527020 DEFB128Q7Z7B8 93 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 SPPL2CQ8IUH8 684 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 ZFAND2BQ8WV99 257 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 PDLIM5Q96HC4 596 aaKnown RBP17.38■□□□□ 0.37
USH1C-205ENST00000527020 C1orf50Q9BV19 199 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 SEZ6LQ9BYH1 1024 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 ZNF334Q9HCZ1 680 aaPredicted RBP17.38■□□□□ 0.37
USH1C-205ENST00000527020 PKP3Q9Y446 797 aa17.38■□□□□ 0.37
USH1C-205ENST00000527020 AQP12BA6NM10 295 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 KIF3CO14782 793 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 PGLSO95336 258 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 FAM58BPP0C7Q3 252 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 IYDQ6PHW0 289 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 Q6ZNB5 142 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 Q6ZSR9 355 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 FAM43BQ6ZT52 329 aaPredicted RBP17.37■□□□□ 0.37
USH1C-205ENST00000527020 ERMP1Q7Z2K6 904 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 CAMK1DQ8IU85 385 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 AQP12AQ8IXF9 295 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 STK40Q8N2I9 435 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 METTL25Q8N6Q8 603 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms