RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 TEX26Q8N6G2 289 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 KCTD6Q8NC69 237 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 CLEC18CQ8NCF0 446 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 GPR26Q8NDV2 337 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 ARRDC2Q8TBH0 407 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 CCHCR1Q8TD31 782 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 NAT14Q8WUY8 206 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 CPLX3Q8WVH0 158 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 RSC1A1Q92681 617 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 EID2BQ96D98 161 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 ZPBPQ9BS86 351 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 MLPHQ9BV36 600 aaPredicted RBP6.48□□□□□ -1.37
CD44-221ENST00000526000 POLR1EQ9GZS1 481 aaKnown RBP6.48□□□□□ -1.37
CD44-221ENST00000526000 ZNHIT6Q9NWK9 470 aaKnown RBP6.48□□□□□ -1.37
CD44-221ENST00000526000 SIDT1Q9NXL6 827 aaKnown RBP6.48□□□□□ -1.37
CD44-221ENST00000526000 PKD2L2Q9NZM6 624 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 AIPL1Q9NZN9 384 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 RCOR3Q9P2K3 495 aaPredicted RBP6.48□□□□□ -1.37
CD44-221ENST00000526000 PSMD13Q9UNM6 376 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 KCTD3Q9Y597 815 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 ICE1Q9Y2F5 2266 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 LRP4O75096 1905 aa6.48□□□□□ -1.37
CD44-221ENST00000526000 SPTAN1Q13813 2472 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 IGHV5-51A0A0C4DH38 117 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 KIR2DS5A0A0G2JLQ3 304 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 A0A0G2JNG1 304 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 OR5K4A6NMS3 321 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 AKR1B15C9JRZ8 316 aaPredicted RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 F5H423 210 aaPredicted RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 KIR2DS3K7RE56 304 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 ZNF185O15231 689 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 BUD23O43709 281 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 KRT86O43790 486 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 NRDCO43847 1150 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 UGT1A9O60656 530 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 RFPL1O75677 317 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 CDK14O94921 469 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 GZMAP12544 262 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 ZNF30P17039 623 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 UGT1A6P19224 532 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 UGT1A1P22309 533 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 UGT1A4P22310 534 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 PCK1P35558 622 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 GARSP41250 739 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 ARL4DP49703 201 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 UBE2IP63279 158 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 GBE1Q04446 702 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 TBX2Q13207 712 aaPredicted RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 MRPL49Q13405 166 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 RAPSNQ13702 412 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 PIGHQ14442 188 aaPredicted RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 KIR2DS5Q14953 304 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 LLGL1Q15334 1064 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 KHDC1Q4VXA5 237 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 HENMT1Q5T8I9 393 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 NCBP2-AS2Q69YL0 99 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 ZNF787Q6DD87 383 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 CAPRIN2Q6IMN6 1127 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 PWWP2BQ6NUJ5 590 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 NLRP8Q86W28 1048 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 PHYKPLQ8IUZ5 450 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 SIDT2Q8NBJ9 832 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 OR8K1Q8NGG5 319 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 GDAP1Q8TB36 358 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 PRR7Q8TB68 274 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 CPT1CQ8TCG5 803 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 MR1Q95460 341 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 CXorf40BQ96DE9 158 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 PPM1MQ96MI6 270 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 DNAJC7Q99615 494 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 MAP3K3Q99759 626 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 HERPUD2Q9BSE4 406 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 NUP85Q9BW27 656 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 TDRD1Q9BXT4 1180 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 GPR63Q9BZJ6 419 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 THAP2Q9H0W7 228 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 CARD9Q9H257 536 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 UGT1A7Q9HAW7 530 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 UGT1A10Q9HAW8 530 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 UGT1A8Q9HAW9 530 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 TRIM39Q9HCM9 518 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 MRPL47Q9HD33 250 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 LHX9Q9NQ69 397 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 UBP1Q9NZI7 540 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 VPS18Q9P253 973 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 FAM8A1Q9UBU6 413 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 IP6K2Q9UHH9 426 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 ANAPC7Q9UJX3 599 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 FARSAQ9Y285 508 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 WDR37Q9Y2I8 494 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 CFAP20Q9Y6A4 193 aaKnown RBP6.47□□□□□ -1.37
CD44-221ENST00000526000 SCINQ9Y6U3 715 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 CACNA1DQ01668 2161 aa6.47□□□□□ -1.37
CD44-221ENST00000526000 SSU72P8A0A1W2PR75 194 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 LILRA5A6NI73 299 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 ANKRD66B4E2M5 251 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 AURKAO14965 403 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 MFAP3LO75121 409 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 LCA5LO95447 670 aa6.46□□□□□ -1.38
CD44-221ENST00000526000 C9P02748 559 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms