RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 PNMA8BQ9ULN7 279 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 KCNK6Q9Y257 313 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 DNAJC16Q9Y2G8 782 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 PRKAB1Q9Y478 270 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 KCTD3Q9Y597 815 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 MAD1L1Q9Y6D9 718 aa5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 DNMT3AQ9Y6K1 912 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P40-201ENST00000525121 COL5A1P20908 1838 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 MYO15AQ9UKN7 3530 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCDC162PA2VCL2 907 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 EME2A4GXA9 379 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 FAM187AA6NFU0 413 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SDR42E2A6NKP2 422 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 OR2AG2A6NM03 316 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMX2-CTNND1H3BSU7 103 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 GOLGA8MH3BSY2 632 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCL22O00626 93 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 GAPDHSO14556 408 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 DNALI1O14645 258 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 GPR39O43194 453 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 NUDT21O43809 227 aaKnown RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 OPA1O60313 960 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 NDUFS3O75489 264 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 TCEA3O75764 348 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 POP7O75817 140 aaKnown RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 URI1O94763 535 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 AP2A2O94973 939 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SLC35G4P0C7Q5 338 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 OR56A5P0C7T3 313 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 GIMD1P0DJR0 217 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 F3P13726 295 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 ATP1B2P14415 290 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 PNLIPP16233 465 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 ACRV1P26436 265 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 MGAT1P26572 445 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 GRIA1P42261 906 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 NSG1P42857 185 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 GPR3P46089 330 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 TTPAP49638 278 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CLCNKAP51800 687 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 MAZP56270 477 aaKnown RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CRADDP78560 199 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SHC2P98077 582 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 XIAPP98170 497 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 HHEXQ03014 270 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CALCOCO2Q13137 446 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 THOC5Q13769 683 aaKnown RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 TUBB2AQ13885 445 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 KRT33BQ14525 404 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 HLTFQ14527 1009 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 MORF4L2Q15014 288 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMED2Q15363 201 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SEPT7Q16181 437 aaKnown RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 WHAMMP3Q1A5X7 153 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 MAP9Q49MG5 647 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 BCL7AQ4VC05 210 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SYTL3Q4VX76 610 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 RNF187Q5TA31 235 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 IZUMO3Q5VZ72 239 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 KCTD16Q68DU8 428 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 OGFOD3Q6PK18 319 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMEM220Q6QAJ8 160 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 RBM44Q6ZP01 1051 aaKnown RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SLCO6A1Q86UG4 719 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 HOOK3Q86VS8 718 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SERPINA9Q86WD7 417 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 NRROSQ86YC3 692 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 JAMLQ86YT9 394 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCNJLQ8IV13 435 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 RBM12BQ8IXT5 1001 aaKnown RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 PDIK1LQ8N165 341 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 MPP5Q8N3R9 675 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CHCHD4Q8N4Q1 142 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 RASGEF1AQ8N9B8 481 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 Q8N9G6 341 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 GPR156Q8NFN8 814 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 OR4L1Q8NH43 312 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 OR10G6Q8NH81 332 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCL4L1Q8NHW4 92 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 KIF18AQ8NI77 898 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 GSDMBQ8TAX9 411 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 HM13Q8TCT9 377 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CPT1BQ92523 772 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 HDAC10Q969S8 669 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 GRAMD1AQ96CP6 724 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CXorf40BQ96DE9 158 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 STAMBPL1Q96FJ0 436 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SNF8Q96H20 258 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 AHCYL2Q96HN2 611 aaKnown RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMEM74Q96NL1 305 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 GFM1Q96RP9 751 aaKnown RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 KRT12Q99456 494 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SLC38A3Q99624 504 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCDC3Q9BQI4 270 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 NAT9Q9BTE0 207 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 TUBB2BQ9BVA1 445 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 SCNM1Q9BWG6 230 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 STRADBQ9C0K7 418 aa5.32□□□□□ -1.56
HMGB1P40-201ENST00000525121 RAB17Q9H0T7 212 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms