RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 CMTM5Q96DZ9 223 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 PTCD3Q96EY7 689 aaKnown RBP7.48□□□□□ -1.21
CTR9-202ENST00000524523 SCYL1Q96KG9 808 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 MCCC1Q96RQ3 725 aaPredicted RBP7.48□□□□□ -1.21
CTR9-202ENST00000524523 BTBD10Q9BSF8 475 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 GATA5Q9BWX5 397 aaPredicted RBP7.48□□□□□ -1.21
CTR9-202ENST00000524523 C1QTNF3Q9BXJ4 246 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 OSBPL1AQ9BXW6 950 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 C20orf27Q9GZN8 174 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 CAB39LQ9H9S4 337 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 ZFYVE1Q9HBF4 777 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 PFDN4Q9NQP4 134 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 MAN1C1Q9NR34 630 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 FBXO6Q9NRD1 293 aaPredicted RBP7.48□□□□□ -1.21
CTR9-202ENST00000524523 TMEM45AQ9NWC5 275 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 GDE1Q9NZC3 331 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 NFKBIL1Q9UBC1 381 aaPredicted RBP7.48□□□□□ -1.21
CTR9-202ENST00000524523 DKK3Q9UBP4 350 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 DNAJC16Q9Y2G8 782 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 OAS3Q9Y6K5 1087 aaKnown RBP7.48□□□□□ -1.21
CTR9-202ENST00000524523 SLC30A1Q9Y6M5 507 aa7.48□□□□□ -1.21
CTR9-202ENST00000524523 KIAA0100Q14667 2235 aaKnown RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 CAPN8A6NHC0 703 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 STX16-NPEPL1H3BU86 382 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 FCHO1O14526 889 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 STX16O14662 325 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 PRMT5O14744 637 aaPredicted RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 PHGDHO43175 533 aaKnown RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 KLK8O60259 260 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 SMIM24O75264 130 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 VPS26AO75436 327 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 ZNF821O75541 412 aaPredicted RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 PDHA1P08559 390 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 HSPA1AP0DMV8 641 aaKnown RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 HSPA1BP0DMV9 641 aaKnown RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 CBSLP0DN79 551 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 SRCP12931 536 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 ZNF37AP17032 561 aaPredicted RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 SERPINB3P29508 390 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 CA8P35219 290 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 CBSP35520 551 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 CCR2P41597 374 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 NAGLUP54802 743 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 PCDH1Q08174 1060 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 GALNT3Q14435 633 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 EIF4HQ15056 248 aaKnown RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 CDKN3Q16667 212 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 SPRED3Q2MJR0 410 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 HSF5Q4G112 596 aaPredicted RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 CFAP157Q5JU67 520 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 DGKKQ5KSL6 1271 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 PLPP4Q5VZY2 271 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 SEL1L3Q68CR1 1132 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 USP45Q70EL2 814 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 SNX20Q7Z614 316 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 MFSD6LQ8IWD5 586 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 APCDD1Q8J025 514 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 RBFAQ8N0V3 343 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 CPSF7Q8N684 471 aaKnown RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 ACVR1CQ8NER5 493 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 LPCAT1Q8NF37 534 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 OR13C4Q8NGS5 318 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 ZNF707Q96C28 371 aaPredicted RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 ULK4Q96C45 1275 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 SLC7A6OSQ96CW6 309 aaPredicted RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 ATXN7L3BQ96GX2 97 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 NSMCE3Q96MG7 304 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 RILPQ96NA2 401 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 BIRC8Q96P09 236 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 PLEKHG4BQ96PX9 1271 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 GPR63Q9BZJ6 419 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 SLC40A1Q9NP59 571 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 KLC4Q9NSK0 619 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 MARCH4Q9P2E8 410 aaPredicted RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 XPR1Q9UBH6 696 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 TAGLN3Q9UI15 199 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 INTS6Q9UL03 887 aaKnown RBP7.47□□□□□ -1.21
CTR9-202ENST00000524523 STK38LQ9Y2H1 464 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 DHRS7Q9Y394 339 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 ZNF711Q9Y462 761 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 KCTD3Q9Y597 815 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 SPO11Q9Y5K1 396 aa7.47□□□□□ -1.21
CTR9-202ENST00000524523 ANAPC1Q9H1A4 1944 aa7.46□□□□□ -1.21
CTR9-202ENST00000524523 CCDC195A0A1B0GUA6 201 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 TSPAN11A1L157 253 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 QSOX1O00391 747 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 KPNA5O15131 536 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 ITM2AO43736 263 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 MAGEC1O60732 1142 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 KERAO60938 352 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 SRP72O76094 671 aaKnown RBP7.46□□□□□ -1.22
CTR9-202ENST00000524523 MT-CO1P00395 513 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 LMNAP02545 664 aaKnown RBP7.46□□□□□ -1.22
CTR9-202ENST00000524523 CD1DP15813 335 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 POLR2EP19388 210 aaKnown RBP7.46□□□□□ -1.22
CTR9-202ENST00000524523 ITGALP20701 1170 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 HLA-FP30511 346 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 MC4RP32245 332 aa7.46□□□□□ -1.22
CTR9-202ENST00000524523 CD70P32970 193 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms