RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 XAB2Q9HCS7 855 aaKnown RBP12.66□□□□□ -0.38
VEGFA-224ENST00000523873 TRNAU1APQ9NX07 287 aaKnown RBP12.66□□□□□ -0.38
VEGFA-224ENST00000523873 TOR4AQ9NXH8 423 aa12.66□□□□□ -0.38
VEGFA-224ENST00000523873 IL1RAPL1Q9NZN1 696 aa12.66□□□□□ -0.38
VEGFA-224ENST00000523873 TAAR2Q9P1P5 351 aa12.66□□□□□ -0.38
VEGFA-224ENST00000523873 SLC23A2Q9UGH3 650 aa12.66□□□□□ -0.38
VEGFA-224ENST00000523873 RIMKLBQ9ULI2 386 aa12.66□□□□□ -0.38
VEGFA-224ENST00000523873 SOX13Q9UN79 622 aa12.66□□□□□ -0.38
VEGFA-224ENST00000523873 TRBV23OR9-2A0A075B6M9 112 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 TRBV5-4A0A0C4DH59 114 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 FAM187AA6NFU0 413 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 AGAP14A8MT82 685 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 GOLGA8KD6RF30 607 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 GOLGA8TH3BQL2 631 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 AP3B1O00203 1094 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 TPP1O14773 563 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 CHUKO15111 745 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 TP73O15350 636 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 TNFSF14O43557 240 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 VEGFDO43915 354 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 SEC31AO94979 1220 aaKnown RBP12.65□□□□□ -0.38
VEGFA-224ENST00000523873 TUBB4AP04350 444 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 F7P08709 466 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-224ENST00000523873 FTH1P19P0C7X4 201 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 MLNP12872 115 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 ACRV1P26436 265 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 ARNTP27540 789 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 PBLDP30039 288 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-224ENST00000523873 CLDN6P56747 220 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 PRAMEP78395 509 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 SLC7A5Q01650 507 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 DHX9Q08211 1270 aaKnown RBP12.65□□□□□ -0.38
VEGFA-224ENST00000523873 LAMB3Q13751 1172 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 DBN1Q16643 649 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 INSCQ1MX18 579 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 ZCCHC8Q6NZY4 707 aaKnown RBP12.65□□□□□ -0.38
VEGFA-224ENST00000523873 AFTPHQ6ULP2 937 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 NLRP9Q7RTR0 991 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 PCGF5Q86SE9 256 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 TRAPPC5Q8IUR0 188 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 ZNF669Q96BR6 464 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-224ENST00000523873 SGF29Q96ES7 293 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 SIGLEC10Q96LC7 697 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 FCRL3Q96P31 734 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-224ENST00000523873 C19orf43Q9BQ61 176 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 DUSP23Q9BVJ7 150 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 DPEP2Q9H4A9 486 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 RMI1Q9H9A7 625 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 MRM3Q9HC36 420 aaKnown RBP12.65□□□□□ -0.38
VEGFA-224ENST00000523873 KLC4Q9NSK0 619 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 ZDHHC3Q9NYG2 299 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 MARCH4Q9P2E8 410 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-224ENST00000523873 DNAJC16Q9Y2G8 782 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 MAD1L1Q9Y6D9 718 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 PRSS21Q9Y6M0 314 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 KIF26BQ2KJY2 2108 aa12.65□□□□□ -0.38
VEGFA-224ENST00000523873 SPTBN4Q9H254 2564 aa12.65□□□□□ -0.39
VEGFA-224ENST00000523873 CPED1A4D0V7 1026 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 SDR42E2A6NKP2 422 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 CASC3O15234 703 aaKnown RBP12.64□□□□□ -0.39
VEGFA-224ENST00000523873 SGTAO43765 313 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 NOBOXO60393 691 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 SNX2O60749 519 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 TOP3BO95985 862 aaKnown RBP12.64□□□□□ -0.39
VEGFA-224ENST00000523873 ZNF7P17097 686 aaPredicted RBP12.64□□□□□ -0.39
VEGFA-224ENST00000523873 ACADVLP49748 655 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 MAZP56270 477 aaKnown RBP12.64□□□□□ -0.39
VEGFA-224ENST00000523873 MORF4L2Q15014 288 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 NR0B2Q15466 257 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 TRADDQ15628 312 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 BBS9Q3SYG4 887 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 GPR33Q49SQ1 333 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 PERM1Q5SV97 790 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 GUSBP11Q6P575 273 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 C11orf96Q7Z7L8 435 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 GLRX5Q86SX6 157 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 HOOK3Q86VS8 718 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 IGDCC3Q8IVU1 814 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 NOA1Q8NC60 698 aaKnown RBP12.64□□□□□ -0.39
VEGFA-224ENST00000523873 OR4L1Q8NH43 312 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 ZDHHC1Q8WTX9 485 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 DCUN1D1Q96GG9 259 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 COPS8Q99627 209 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 ERP44Q9BS26 406 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 LRRC1Q9BTT6 524 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 OSGEPL1Q9H4B0 414 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 SAMD15Q9P1V8 674 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 FAM8A1Q9UBU6 413 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 ANAPC5Q9UJX4 755 aa12.64□□□□□ -0.39
VEGFA-224ENST00000523873 WDR87Q6ZQQ6 2873 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 KMOO15229 486 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 OR1I1O60431 355 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 POP7O75817 140 aaKnown RBP12.63□□□□□ -0.39
VEGFA-224ENST00000523873 VAPBO95292 243 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 CKMT1AP12532 417 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 CKMT2P17540 419 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 LRP8Q14114 963 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 SEPT7Q16181 437 aaKnown RBP12.63□□□□□ -0.39
VEGFA-224ENST00000523873 ANKRD20A4Q4UJ75 823 aa12.63□□□□□ -0.39
VEGFA-224ENST00000523873 FASTKD1Q53R41 847 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms