RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 EPOP01588 193 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 PLA2G2AP14555 144 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 VCLP18206 1134 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 HMGCLP35914 325 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 UBE2IP63279 158 aaKnown RBP15.6■□□□□ 0.09
CLN8-205ENST00000520991 ATP13A5Q4VNC0 1218 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 ZDHHC20Q5W0Z9 365 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 GLT6D1Q7Z4J2 308 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 TRAPPC5Q8IUR0 188 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 IL22RA1Q8N6P7 574 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 IPMKQ8NFU5 416 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 BLOC1S5Q8TDH9 187 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 KRT35Q92764 455 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 OXNAD1Q96HP4 312 aaPredicted RBP15.6■□□□□ 0.09
CLN8-205ENST00000520991 MRGPRX2Q96LB1 330 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 TTC25Q96NG3 672 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 VPS35Q96QK1 796 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 FERMT1Q9BQL6 677 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 ARHGAP9Q9BRR9 750 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 FSD1LQ9BXM9 530 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 HACD3Q9P035 362 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 SLC23A2Q9UGH3 650 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 KLHL3Q9UH77 587 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 RSPH14Q9UHP6 348 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 TRHDEQ9UKU6 1024 aa15.6■□□□□ 0.09
CLN8-205ENST00000520991 MACROD2A1Z1Q3 448 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 LILRA5A6NI73 299 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 H7C0C1 242 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 ITGB2P05107 769 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 XRCC1P18887 633 aaPredicted RBP15.59■□□□□ 0.09
CLN8-205ENST00000520991 HLA-DPA1P20036 260 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 SPAM1P38567 509 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 CHRNA4P43681 627 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 ATP5OP48047 213 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 ARSDP51689 593 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 NAP1L1P55209 391 aaKnown RBP15.59■□□□□ 0.09
CLN8-205ENST00000520991 MPP3Q13368 585 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 SLC1A5Q15758 541 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 PPP2R5EQ16537 467 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 KHDC1Q4VXA5 237 aaKnown RBP15.59■□□□□ 0.09
CLN8-205ENST00000520991 ANKS6Q68DC2 871 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 ARHGAP22Q7Z5H3 698 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 PLXDC1Q8IUK5 500 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 TTC30BQ8N4P2 665 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 EXTL1Q92935 676 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 NKD1Q969G9 470 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 TEFMQ96QE5 360 aaKnown RBP15.59■□□□□ 0.09
CLN8-205ENST00000520991 ZCCHC2Q9C0B9 1178 aaKnown RBP15.59■□□□□ 0.09
CLN8-205ENST00000520991 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.59■□□□□ 0.09
CLN8-205ENST00000520991 SCHIP1Q9P0W5 487 aaPredicted RBP15.59■□□□□ 0.09
CLN8-205ENST00000520991 PKP3Q9Y446 797 aa15.59■□□□□ 0.09
CLN8-205ENST00000520991 SDK2Q58EX2 2172 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 APOC4-APOC2K7ER74 178 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 APOC2P02655 101 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 WT1P19544 449 aaPredicted RBP15.58■□□□□ 0.08
CLN8-205ENST00000520991 IDSP22304 550 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 RPL10P27635 214 aaKnown RBP15.58■□□□□ 0.08
CLN8-205ENST00000520991 UGT1A3P35503 534 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 COPS2P61201 443 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 TMEM115Q12893 351 aaPredicted RBP15.58■□□□□ 0.08
CLN8-205ENST00000520991 FAM151BQ6UXP7 276 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 TMEM26Q6ZUK4 368 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 BBS12Q6ZW61 710 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 ZNF547Q8IVP9 402 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 CACNA2D3Q8IZS8 1091 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 BMPERQ8N8U9 685 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 BRSK1Q8TDC3 778 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 CTRCQ99895 268 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 UCK1Q9HA47 277 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 IL26Q9NPH9 171 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 TMPRSS11EQ9UL52 423 aa15.58■□□□□ 0.08
CLN8-205ENST00000520991 PIEZO2Q9H5I5 2752 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 GLYATL1P3A0A0U1RQE8 302 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 SOWAHDA6NJG2 315 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 RAD1O60671 282 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 UBXN7O94888 489 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 NDUFA10O95299 355 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 TYRP1P17643 537 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 AMD1P17707 334 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 CTNNA2P26232 953 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 RBL1P28749 1068 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 CTNNA1P35221 906 aaKnown RBP15.57■□□□□ 0.08
CLN8-205ENST00000520991 SLC19A1P41440 591 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 DRG2P55039 364 aaKnown RBP15.57■□□□□ 0.08
CLN8-205ENST00000520991 CYP4F2P78329 520 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 MC2RQ01718 297 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 XRCC4Q13426 336 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 CHRNA6Q15825 494 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 ITPRIPL1Q6GPH6 555 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 XKR5Q6UX68 686 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 CEACAM20Q6UY09 585 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 CXorf40BQ96DE9 158 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 RTP4Q96DX8 246 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 CALR3Q96L12 384 aaKnown RBP15.57■□□□□ 0.08
CLN8-205ENST00000520991 PANX2Q96RD6 677 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 ZPBPQ9BS86 351 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 GBA3Q9H227 469 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 POT1Q9NUX5 634 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 IL17CQ9P0M4 197 aa15.57■□□□□ 0.08
CLN8-205ENST00000520991 ZNF624Q9P2J8 865 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms