RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 TMEM9BQ9NQ34 198 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 MOSPD1Q9UJG1 213 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 SLC30A1Q9Y6M5 507 aa15.16■□□□□ 0.02
LSM1-203ENST00000520755 HOXC4P09017 264 aaPredicted RBP15.15■□□□□ 0.02
LSM1-203ENST00000520755 NUDT17P0C025 328 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 KELP23276 732 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 ACRV1P26436 265 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 GABRB3P28472 473 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 PHBP35232 272 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 ARRB1P49407 418 aaPredicted RBP15.15■□□□□ 0.02
LSM1-203ENST00000520755 B4GALNT1Q00973 533 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 EIF2B5Q13144 721 aaKnown RBP15.15■□□□□ 0.02
LSM1-203ENST00000520755 CTBP1Q13363 440 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 FASTKD1Q53R41 847 aaKnown RBP15.15■□□□□ 0.02
LSM1-203ENST00000520755 GPRC6AQ5T6X5 926 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 MARK2Q7KZI7 788 aaKnown RBP15.15■□□□□ 0.02
LSM1-203ENST00000520755 RD3Q7Z3Z2 195 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 SERPINA9Q86WD7 417 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 HID1Q8IV36 788 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 OXR1Q8N573 874 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 C2CD4AQ8NCU7 369 aaPredicted RBP15.15■□□□□ 0.02
LSM1-203ENST00000520755 DDHD1Q8NEL9 900 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 OR56A4Q8NGH8 313 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 ANKRD7Q92527 254 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 GLYATL1Q969I3 302 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 TSACCQ96A04 125 aaPredicted RBP15.15■□□□□ 0.02
LSM1-203ENST00000520755 COX14Q96I36 57 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 BOCQ9BWV1 1114 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 FGF22Q9HCT0 170 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 MRPL40Q9NQ50 206 aaKnown RBP15.15■□□□□ 0.02
LSM1-203ENST00000520755 KLQ9UEF7 1012 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 CRLS1Q9UJA2 301 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 PNMA8BQ9ULN7 279 aaPredicted RBP15.15■□□□□ 0.02
LSM1-203ENST00000520755 TMEM98Q9Y2Y6 226 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 OAS3Q9Y6K5 1087 aaKnown RBP15.15■□□□□ 0.02
LSM1-203ENST00000520755 KNL1Q8NG31 2342 aa15.15■□□□□ 0.02
LSM1-203ENST00000520755 WDR87Q6ZQQ6 2873 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 DNAH14Q0VDD8 3507 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 EP300Q09472 2414 aaPredicted RBP15.14■□□□□ 0.01
LSM1-203ENST00000520755 IGLV3-16A0A075B6K0 115 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 A0A1B0GTQ1 180 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.14■□□□□ 0.01
LSM1-203ENST00000520755 C4orf47A7E2U8 309 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 CDX4O14627 284 aaPredicted RBP15.14■□□□□ 0.01
LSM1-203ENST00000520755 SCAMP1O15126 338 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 SDC3O75056 442 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 MTX2O75431 263 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 SLC25A14O95258 325 aaPredicted RBP15.14■□□□□ 0.01
LSM1-203ENST00000520755 ASMTLO95671 621 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 S1PR4O95977 384 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 ABCG1P45844 678 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 POLD2P49005 469 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 CCT8P50990 548 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 SRP54P61011 504 aaKnown RBP15.14■□□□□ 0.01
LSM1-203ENST00000520755 PPARDQ03181 441 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 THOC5Q13769 683 aaKnown RBP15.14■□□□□ 0.01
LSM1-203ENST00000520755 ALG11Q2TAA5 492 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 UAP1L1Q3KQV9 507 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 GPR33Q49SQ1 333 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 ZNF648Q5T619 568 aaPredicted RBP15.14■□□□□ 0.01
LSM1-203ENST00000520755 PHYKPLQ8IUZ5 450 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 RBFAQ8N0V3 343 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 OTUD6BQ8N6M0 293 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 OR2W6PQ8NHA6 318 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 GDAP1Q8TB36 358 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 NAT14Q8WUY8 206 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 BTN2A2Q8WVV5 523 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 OR1E3Q8WZA6 343 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 PDXPQ96GD0 296 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 PPANQ9NQ55 473 aaKnown RBP15.14■□□□□ 0.01
LSM1-203ENST00000520755 FBXO6Q9NRD1 293 aaPredicted RBP15.14■□□□□ 0.01
LSM1-203ENST00000520755 ZFATQ9P243 1243 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 KLF15Q9UIH9 416 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 FBXO5Q9UKT4 447 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 NFS1Q9Y697 457 aa15.14■□□□□ 0.01
LSM1-203ENST00000520755 FAM186AA6NE01 2351 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 H3BM21 787 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 OR1I1O60431 355 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 DFNA5O60443 496 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 FAM155BO75949 473 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 CEACAM5P06731 702 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 NME1P15531 152 aaKnown RBP15.13■□□□□ 0.01
LSM1-203ENST00000520755 JUNDP17535 347 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 SHBQ15464 509 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 TCEA2Q15560 299 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 STPG1Q5TH74 334 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 KCTD16Q68DU8 428 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 MRNIPQ6NTE8 343 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 TAS2R42Q7RTR8 314 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 GALNT7Q86SF2 657 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 LMNTD2Q8IXW0 634 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 PHACTR4Q8IZ21 702 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 PPM1NQ8N819 430 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 CALML6Q8TD86 181 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 LPGAT1Q92604 370 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 ULK4Q96C45 1275 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 CYTH2Q99418 400 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 PAFAH2Q99487 392 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 DHRS4Q9BTZ2 278 aa15.13■□□□□ 0.01
LSM1-203ENST00000520755 TCEAL2Q9H3H9 227 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms