RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CLCN3P51790 818 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 ABATP80404 500 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 SORDQ00796 357 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 DDR1Q08345 913 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 GRIK2Q13002 908 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 ALCAMQ13740 583 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 KRT81Q14533 505 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 TDRD12Q587J7 1177 aaKnown RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 GGNBP1Q5YKI7 109 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 FBXO46Q6PJ61 603 aaPredicted RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 PQLC2Q6ZP29 291 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 Q6ZSV7 163 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 DPPA4Q7L190 304 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 CCDC91Q7Z6B0 441 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 UNC45BQ8IWX7 931 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 OR14L1PQ8NHC6 308 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 PTPMT1Q8WUK0 201 aaPredicted RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 ADAMTS14Q8WXS8 1223 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 CEP295NLQ96MC4 621 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 SPAG5Q96R06 1193 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 NUDCD1Q96RS6 583 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 ACOX2Q99424 681 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 CITED2Q99967 270 aaPredicted RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 PCGF1Q9BSM1 259 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 MMTAG2Q9BU76 263 aaKnown RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 NPFFR1Q9GZQ6 430 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 MMP27Q9H306 513 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 OPA3Q9H6K4 179 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 DDX4Q9NQI0 724 aaKnown RBP4.06□□□□□ -1.76
SQLE-204ENST00000520493 MTMR10Q9NXD2 777 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 GDE1Q9NZC3 331 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 WDR35Q9P2L0 1181 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 DNAJB4Q9UDY4 337 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 AMACRQ9UHK6 382 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 KNSTRNQ9Y448 316 aa4.06□□□□□ -1.76
SQLE-204ENST00000520493 GPR75-ASB3A0A0A6YYF3 556 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 LNP1A1A4G5 178 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 I6L893 689 aaPredicted RBP4.05□□□□□ -1.76
SQLE-204ENST00000520493 PSMD14O00487 310 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 SMAD9O15198 467 aaKnown RBP4.05□□□□□ -1.76
SQLE-204ENST00000520493 FCGR1AP12314 374 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 ANXA7P20073 488 aaKnown RBP4.05□□□□□ -1.76
SQLE-204ENST00000520493 PTAFRP25105 342 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 PSMA3P25788 255 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 HOXC8P31273 242 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 RFX5P48382 616 aaPredicted RBP4.05□□□□□ -1.76
SQLE-204ENST00000520493 PPP3CCP48454 512 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 GPR143P51810 404 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 NUDT6P53370 316 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 SEC61A1P61619 476 aaKnown RBP4.05□□□□□ -1.76
SQLE-204ENST00000520493 HYAL1Q12794 435 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 PPP2R5CQ13362 524 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 C2orf68Q2NKX9 166 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 KRBOX4Q5JUW0 171 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 CST9LP1Q5W188 147 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 SIGIRRQ6IA17 410 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 DHRS7BQ6IAN0 325 aaPredicted RBP4.05□□□□□ -1.76
SQLE-204ENST00000520493 PET117Q6UWS5 81 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 Q6ZTC4 211 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 MTSS1LQ765P7 747 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 HAPLN4Q86UW8 402 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 FJX1Q86VR8 437 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 CCAR2Q8N163 923 aaKnown RBP4.05□□□□□ -1.76
SQLE-204ENST00000520493 NUP93Q8N1F7 819 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 GUF1Q8N442 669 aaKnown RBP4.05□□□□□ -1.76
SQLE-204ENST00000520493 CARNMT1Q8N4J0 409 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 ARL10Q8N8L6 244 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 TSPAN14Q8NG11 270 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 OR6J1Q8NGC5 347 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 SIPA1Q96FS4 1042 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 LMLNQ96KR4 655 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 CCDC106Q9BWC9 280 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 DNAI2Q9GZS0 605 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 TMEM39BQ9GZU3 492 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 LHPPQ9H008 270 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 HINT3Q9NQE9 182 aaKnown RBP4.05□□□□□ -1.76
SQLE-204ENST00000520493 IL17BQ9UHF5 180 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 TUBE1Q9UJT0 475 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 ACSL5Q9ULC5 683 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 PLAGL1Q9UM63 463 aa4.05□□□□□ -1.76
SQLE-204ENST00000520493 WBP11Q9Y2W2 641 aaKnown RBP4.05□□□□□ -1.76
SQLE-204ENST00000520493 NOTCH4Q99466 2003 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 A6NL46 340 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 MAP2K7O14733 419 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 PSMD10O75832 226 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 RECQL5O94762 991 aaPredicted RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 RGS11O94810 467 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 GOSR1O95249 250 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 FTCDO95954 541 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 FYNP06241 537 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 PTMAP06454 111 aaKnown RBP4.04□□□□□ -1.76
SQLE-204ENST00000520493 STMN1P16949 149 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 NAGAP17050 411 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 FASLGP48023 281 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 ALDH3A2P51648 485 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 SREBF2Q12772 1141 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 E2F5Q15329 346 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 PNLIPRP3Q17RR3 467 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 ZNF805Q5CZA5 627 aa4.04□□□□□ -1.76
SQLE-204ENST00000520493 PPP6R3Q5H9R7 873 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms