RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SLC30A1Q9Y6M5 507 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 AKR1B15C9JRZ8 316 aaPredicted RBP12.25□□□□□ -0.45
CSMD1-205ENST00000519623 SPOPO43791 374 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 VEGFDO43915 354 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 RAD1O60671 282 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 CDK14O94921 469 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 SLC4A1P02730 911 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 C9P02748 559 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 SFTPCP11686 197 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 BRAFP15056 766 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 MAPK9P45984 424 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 WNT3AP56704 352 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 NOMO1Q15155 1222 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 PLA2G4EQ3MJ16 856 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 ATP13A5Q4VNC0 1218 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 SIRPB2Q5JXA9 342 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 KAZNQ674X7 775 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 WASH2PQ6VEQ5 465 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 C11orf96Q7Z7L8 435 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 LRRTM4Q86VH4 590 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 PLXDC1Q8IUK5 500 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 CNGA4Q8IV77 575 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 AVL9Q8NBF6 648 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 RNF214Q8ND24 703 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 DTX3LQ8TDB6 740 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 VPS35Q96QK1 796 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 GOLPH3Q9H4A6 298 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 OSGEPL1Q9H4B0 414 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 IL26Q9NPH9 171 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 WASH6PQ9NQA3 447 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 KLHL3Q9UH77 587 aa12.25□□□□□ -0.45
CSMD1-205ENST00000519623 MN1Q10571 1320 aaPredicted RBP12.25□□□□□ -0.45
CSMD1-205ENST00000519623 PYCARD-AS1I3L0S3 204 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 MTSS1O43312 755 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 PSTPIP1O43586 416 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 SLC28A2O43868 658 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 LCA5LO95447 670 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 VIPP01282 170 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 ANKRD34CP0C6C1 535 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 TYRP1P17643 537 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 NFKB1P19838 968 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 RPL10P27635 214 aaKnown RBP12.24□□□□□ -0.45
CSMD1-205ENST00000519623 MAP4P27816 1152 aaKnown RBP12.24□□□□□ -0.45
CSMD1-205ENST00000519623 CA5AP35218 305 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 MAGEA1P43355 309 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 GFERP55789 205 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 TMEM115Q12893 351 aaPredicted RBP12.24□□□□□ -0.45
CSMD1-205ENST00000519623 INSCQ1MX18 579 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 TFDP3Q5H9I0 405 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 AGAP9Q5VTM2 703 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 CEACAM20Q6UY09 585 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 ZC3H18Q86VM9 953 aaKnown RBP12.24□□□□□ -0.45
CSMD1-205ENST00000519623 KATNAL2Q8IYT4 538 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 RCOR2Q8IZ40 523 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 NLGN4XQ8N0W4 816 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 ZNF567Q8N184 647 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 TC2NQ8N9U0 490 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 NLGN4YQ8NFZ3 816 aaPredicted RBP12.24□□□□□ -0.45
CSMD1-205ENST00000519623 OXNAD1Q96HP4 312 aaPredicted RBP12.24□□□□□ -0.45
CSMD1-205ENST00000519623 SLC45A3Q96JT2 553 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 MRGPRX2Q96LB1 330 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 C9orf72Q96LT7 481 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 FCRL5Q96RD9 977 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 ZPBPQ9BS86 351 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 TRABDQ9H4I3 376 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 SLC40A1Q9NP59 571 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 GEMIN8Q9NWZ8 242 aaKnown RBP12.24□□□□□ -0.45
CSMD1-205ENST00000519623 SIDT1Q9NXL6 827 aaKnown RBP12.24□□□□□ -0.45
CSMD1-205ENST00000519623 IL17CQ9P0M4 197 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 DNAJC16Q9Y2G8 782 aa12.24□□□□□ -0.45
CSMD1-205ENST00000519623 TMEM184BQ9Y519 407 aaPredicted RBP12.24□□□□□ -0.45
CSMD1-205ENST00000519623 hCG_1818297A0A087WSY0 165 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 LOC101059948A0A1B0GTJ6 334 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 POLR1CO15160 346 aaPredicted RBP12.23□□□□□ -0.45
CSMD1-205ENST00000519623 CAPN5O15484 640 aaPredicted RBP12.23□□□□□ -0.45
CSMD1-205ENST00000519623 NKX2-8O15522 239 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 UGT1A9O60656 530 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 UBXN7O94888 489 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 ZRANB2O95218 330 aaKnown RBP eCLIP12.23□□□□□ -0.45
CSMD1-205ENST00000519623 UGT1A6P19224 532 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 IDSP22304 550 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 UGT1A1P22309 533 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 UGT1A4P22310 534 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 CHRNA4P43681 627 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 MARCKSL1P49006 195 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 DRG2P55039 364 aaKnown RBP12.23□□□□□ -0.45
CSMD1-205ENST00000519623 NFKB2Q00653 900 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 SLC1A5Q15758 541 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 CHRNA6Q15825 494 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 SEPT7Q16181 437 aaKnown RBP12.23□□□□□ -0.45
CSMD1-205ENST00000519623 PID1Q7Z2X4 250 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 SLC25A41Q8N5S1 370 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 BRSK1Q8TDC3 778 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 P3H4Q92791 437 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 VAT1Q99536 393 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 FAM117AQ9C073 453 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 UGT1A7Q9HAW7 530 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 UGT1A10Q9HAW8 530 aa12.23□□□□□ -0.45
CSMD1-205ENST00000519623 UGT1A8Q9HAW9 530 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms