RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CD1DP15813 335 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 TFEBP19484 476 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 CA5AP35218 305 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 MMP12P39900 470 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 P2RY2P41231 377 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 DNAJB13P59910 316 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 RPS14P62263 151 aaKnown RBP14.34□□□□□ -0.11
CLN8-204ENST00000519254 RCN2Q14257 317 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 CTSL3PQ5NE16 218 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 FAM151BQ6UXP7 276 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 TMEM92Q6UXU6 159 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 TAS2R42Q7RTR8 314 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 TMPRSS6Q8IU80 811 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 LSMEM2Q8N112 164 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 GJD3Q8N144 294 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 AADATQ8N5Z0 425 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 ZNF781Q8N8C0 355 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 PTERQ96BW5 349 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 SHDQ96IW2 340 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 WWP1Q9H0M0 922 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 LTB4R2Q9NPC1 389 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 IL26Q9NPH9 171 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 GALPQ9UBC7 116 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 MMP17Q9ULZ9 603 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 A0A1W2PP55 124 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 KANSL1LA0AUZ9 987 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 FAM170BA6NMN3 283 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 FCHO1O14526 889 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 RNASEH2AO75792 299 aaKnown RBP14.34□□□□□ -0.11
CLN8-204ENST00000519254 UNC5CO95185 931 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 C1SP09871 688 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 ELFN1P0C7U0 828 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 PKMP14618 531 aaKnown RBP14.34□□□□□ -0.11
CLN8-204ENST00000519254 BPIP17213 487 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 SKIV2L2P42285 1042 aaKnown RBP14.34□□□□□ -0.11
CLN8-204ENST00000519254 PTGER3P43115 390 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 PTSQ03393 145 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 ZBTB16Q05516 673 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 PDAP1Q13442 181 aaKnown RBP14.34□□□□□ -0.11
CLN8-204ENST00000519254 TUBB3Q13509 450 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 LRRC32Q14392 662 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 ARL13AQ5H913 290 aaPredicted RBP14.34□□□□□ -0.11
CLN8-204ENST00000519254 AARS2Q5JTZ9 985 aaKnown RBP14.34□□□□□ -0.11
CLN8-204ENST00000519254 PAQR3Q6TCH7 311 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.34□□□□□ -0.11
CLN8-204ENST00000519254 RFLNAQ6ZTI6 216 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 DPPA4Q7L190 304 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 UBALD2Q8IYN6 164 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 HDDC3Q8N4P3 179 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 NECAB3Q96P71 396 aaPredicted RBP14.34□□□□□ -0.11
CLN8-204ENST00000519254 CDH19Q9H159 772 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 CCDC68Q9H2F9 335 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 ALG9Q9H6U8 611 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 CD320Q9NPF0 282 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 TAS2R13Q9NYV9 303 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 SERGEFQ9UGK8 458 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 TRIM33Q9UPN9 1127 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 OAS3Q9Y6K5 1087 aaKnown RBP14.34□□□□□ -0.11
CLN8-204ENST00000519254 SLC30A1Q9Y6M5 507 aa14.34□□□□□ -0.11
CLN8-204ENST00000519254 TCRBV21S2A2A0A5A6 115 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 A8MT66 165 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 H3BMM5 538 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 PFDN6O15212 129 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 SPINT1O43278 529 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 DNTTP04053 509 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 C5AR1P21730 350 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 CD9P21926 228 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 DRD3P35462 400 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 ADARP55265 1226 aaKnown RBP14.33□□□□□ -0.12
CLN8-204ENST00000519254 STARD6P59095 220 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 ELP6Q0PNE2 266 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 ASPHQ12797 758 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 RALGDSQ12967 914 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 KIAA1324Q6UXG2 1013 aaKnown RBP14.33□□□□□ -0.12
CLN8-204ENST00000519254 TRIM67Q6ZTA4 783 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 ASRGL1Q7L266 308 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 HSD11B1LQ7Z5J1 315 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 CBARPQ8N350 705 aaPredicted RBP14.33□□□□□ -0.12
CLN8-204ENST00000519254 GPR21Q99679 349 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 SLC30A3Q99726 388 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 HDAC8Q9BY41 377 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 NMUR2Q9GZQ4 415 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 ILKAPQ9H0C8 392 aaPredicted RBP14.33□□□□□ -0.12
CLN8-204ENST00000519254 P2RY12Q9H244 342 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 TBC1D17Q9HA65 648 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 SAR1AQ9NR31 198 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 TXLNGQ9NUQ3 528 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 DNAJC28Q9NX36 388 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 CD84Q9UIB8 345 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 HAO1Q9UJM8 370 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 RAP2CQ9Y3L5 183 aa14.33□□□□□ -0.12
CLN8-204ENST00000519254 TRBV5-4A0A0C4DH59 114 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 NPHS1O60500 1241 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 NIPSNAP2O75323 286 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 ATP5HO75947 161 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 IPO13O94829 963 aaKnown RBP14.32□□□□□ -0.12
CLN8-204ENST00000519254 CBX6O95503 412 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 PRAMEF1O95521 474 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 ZNF30P17039 623 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 MPSTP25325 297 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms