RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 MGAT4DA6NG13 374 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 ACOT8O14734 319 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 IL6P05231 212 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 CD36P16671 472 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 ALDH4A1P30038 563 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 FCHO2Q0JRZ9 810 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 LRP8Q14114 963 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 QPRTQ15274 297 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 ZNF678Q5SXM1 525 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 KIAA1841Q6NSI8 718 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 ZNF534Q76KX8 674 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 ANKRD13BQ86YJ7 626 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 CMTR2Q8IYT2 770 aaKnown RBP8.44□□□□□ -1.06
PCM1-212ENST00000519253 ST14Q9Y5Y6 855 aa8.44□□□□□ -1.06
PCM1-212ENST00000519253 COL22A1Q8NFW1 1626 aaPredicted RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 A0A1B0GUL6 1792 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 YJEFN3A6XGL0 299 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 NOBOXO60393 691 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 FAM163BP0C2L3 166 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 IL7RP16871 459 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 PAX3P23760 479 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 LMO2P25791 158 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 MTPNP58546 118 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 DDX39BQ13838 428 aaKnown RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 RBM20Q5T481 1227 aaKnown RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 TTC29Q8NA56 475 aaPredicted RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 OSBPL2Q9H1P3 480 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 MINDY3Q9H8M7 445 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 PDP1Q9P0J1 537 aaPredicted RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 UBA2Q9UBT2 640 aaPredicted RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 NRCAMQ92823 1304 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 RFXANKO14593 260 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 RGS20O76081 388 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 ITIH1P19827 911 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 GMPRP36959 345 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 RECQLP46063 649 aaPredicted RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 NDUFV1P49821 464 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 CYP4F3Q08477 520 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 ACOX1Q15067 660 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 RAB6CQ53S08 254 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 GLB1LQ6UWU2 654 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 GALNT5Q7Z7M9 940 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 LDB1Q86U70 411 aaPredicted RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 CENPIQ92674 756 aaPredicted RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 CNDP2Q96KP4 475 aaKnown RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 RAB6CQ9H0N0 254 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 DCSTAMPQ9H295 470 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 MMP27Q9H306 513 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 AGPAT4Q9NRZ5 378 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 RASSF1Q9NS23 344 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 RNF19AQ9NV58 838 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 NUDT4Q9NZJ9 180 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.43□□□□□ -1.06
PCM1-212ENST00000519253 SNX6Q9UNH7 406 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 SNX8Q9Y5X2 465 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 NUMBLQ9Y6R0 609 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 ARAP2Q8WZ64 1704 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 LOC100130705A0A1B0GUX0 176 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 FAM220BPB1ANY3 271 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 F8W810 466 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 RPLP0P05388 317 aaKnown RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 ITGA2P17301 1181 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 LPOP22079 712 aaPredicted RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 PPIBP23284 216 aaKnown RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 CYP2A13Q16696 494 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 PHKG1Q16816 387 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 ZNF404Q494X3 552 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 C6orf183Q5T699 404 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 MFSD4BQ5TF39 518 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 ZCCHC8Q6NZY4 707 aaKnown RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 CASP12Q6UXS9 341 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 CYP4Z1Q86W10 505 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 DNAJB3Q8WWF6 145 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 Q96MT0 163 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 FOPNLQ96NB1 174 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 CLN6Q9NWW5 311 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 MKLN1Q9UL63 735 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 CORO2BQ9UQ03 480 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 IPPQ9Y573 584 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 RBM47A0AV96 593 aaKnown RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 MYL12BO14950 172 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 PAPSS2O95340 614 aaPredicted RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 SIX3O95343 332 aaPredicted RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 PGK1P00558 417 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 CTSHP09668 335 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 MAGP20916 626 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 HUNKP57058 714 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 SLC36A3Q495N2 470 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 SULT1C3Q6IMI6 304 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 TUBA3EQ6PEY2 450 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 TAC4Q86UU9 113 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 AMIGO3Q86WK7 504 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 SYT12Q8IV01 421 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 RTL3Q8N8U3 475 aaKnown RBP8.43□□□□□ -1.06
PCM1-212ENST00000519253 MYLPFQ96A32 169 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 RNF11Q9Y3C5 154 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 HMX2A2RU54 273 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 PSMD11O00231 422 aa8.43□□□□□ -1.06
PCM1-212ENST00000519253 KERAO60938 352 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms