RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 MGAT1P26572 445 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 CRADDP78560 199 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 DR1Q01658 176 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 INSCQ1MX18 579 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 PERM1Q5SV97 790 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 C17orf82Q86X59 251 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-217ENST00000518538 NAGSQ8N159 534 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 GALNT15Q8N3T1 639 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 HEXDCQ8WVB3 486 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 ZNF514Q96K75 400 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-217ENST00000518538 SCNM1Q9BWG6 230 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 FAM96AQ9H5X1 160 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 CHRAC1Q9NRG0 131 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 KLC4Q9NSK0 619 aa21.68■■□□□ 1.06
VEGFA-217ENST00000518538 CCDC162PA2VCL2 907 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 RALBP11234 206 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 GLB1P16278 677 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 ACRV1P26436 265 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 CDKN1CP49918 316 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-217ENST00000518538 CTSCP53634 463 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 PLA2G4EQ3MJ16 856 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 ARMC3Q5W041 872 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 AFTPHQ6ULP2 937 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 MICALCLQ6ZW33 695 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 TAS2R42Q7RTR8 314 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 TMPRSS7Q7RTY8 843 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 C11orf96Q7Z7L8 435 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 CAND1Q86VP6 1230 aaKnown RBP21.67■■□□□ 1.06
VEGFA-217ENST00000518538 SERPINA9Q86WD7 417 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 TMPRSS12Q86WS5 348 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 PPIL6Q8IXY8 311 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 NAT8LQ8N9F0 302 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 HDAC10Q969S8 669 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 DCUN1D1Q96GG9 259 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 COPS8Q99627 209 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 MRM3Q9HC36 420 aaKnown RBP21.67■■□□□ 1.06
VEGFA-217ENST00000518538 XAB2Q9HCS7 855 aaKnown RBP21.67■■□□□ 1.06
VEGFA-217ENST00000518538 SYBUQ9NX95 663 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 ZDHHC3Q9NYG2 299 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 TBC1D29Q9UFV1 150 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 SLC23A2Q9UGH3 650 aa21.67■■□□□ 1.06
VEGFA-217ENST00000518538 DNMT3AQ9Y6K1 912 aaPredicted RBP21.67■■□□□ 1.06
VEGFA-217ENST00000518538 IGLV3-16A0A075B6K0 115 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 OR2AG2A6NM03 316 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 CFAP99D6REC4 459 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 OPA1O60313 960 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 VCLP18206 1134 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 SPINK2P20155 84 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 FOXN2P32314 431 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 MAZP56270 477 aaKnown RBP21.66■■□□□ 1.06
VEGFA-217ENST00000518538 PRAMEP78395 509 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 B4GALNT1Q00973 533 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 INSM1Q01101 510 aaPredicted RBP21.66■■□□□ 1.06
VEGFA-217ENST00000518538 RNASEH2BQ5TBB1 312 aaKnown RBP21.66■■□□□ 1.06
VEGFA-217ENST00000518538 TMEM220Q6QAJ8 160 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 JAMLQ86YT9 394 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 PIANPQ8IYJ0 282 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 MAPK15Q8TD08 544 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 CCDC74AQ96AQ1 378 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 SGSM3Q96HU1 749 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 SERPINB12Q96P63 405 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 CCDC3Q9BQI4 270 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 KIFC1Q9BW19 673 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 OSGEPL1Q9H4B0 414 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 TREX1Q9NSU2 369 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 KLK13Q9UKR3 277 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 NEUROG3Q9Y4Z2 214 aa21.66■■□□□ 1.06
VEGFA-217ENST00000518538 FAM221BA6H8Z2 402 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 A6NCN8 305 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 OR51F1A6NGY5 319 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 PRR19A6NJB7 356 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 DNALI1O14645 258 aaPredicted RBP21.65■■□□□ 1.06
VEGFA-217ENST00000518538 NUDT21O43809 227 aaKnown RBP21.65■■□□□ 1.06
VEGFA-217ENST00000518538 KCNJ13O60928 360 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 AVILO75366 819 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 GOT2P00505 430 aaKnown RBP21.65■■□□□ 1.06
VEGFA-217ENST00000518538 PRSS56P0CW18 603 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 PNLIPP16233 465 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 DHX34Q14147 1143 aaKnown RBP21.65■■□□□ 1.06
VEGFA-217ENST00000518538 BCL7AQ4VC05 210 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 HES3Q5TGS1 186 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 DET1Q7L5Y6 550 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 PCGF5Q86SE9 256 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 ARL14Q8N4G2 192 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 SPATA4Q8NEY3 305 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 PATE1Q8WXA2 126 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.65■■□□□ 1.06
VEGFA-217ENST00000518538 SGF29Q96ES7 293 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 ABCG4Q9H172 646 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 LRIT1Q9P2V4 623 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 SOX13Q9UN79 622 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 DNAJC16Q9Y2G8 782 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 RNF215Q9Y6U7 377 aa21.65■■□□□ 1.06
VEGFA-217ENST00000518538 GOLGA8MH3BSY2 632 aa21.64■■□□□ 1.05
VEGFA-217ENST00000518538 SNX2O60749 519 aa21.64■■□□□ 1.05
VEGFA-217ENST00000518538 POP7O75817 140 aaKnown RBP21.64■■□□□ 1.05
VEGFA-217ENST00000518538 EML2O95834 649 aa21.64■■□□□ 1.05
VEGFA-217ENST00000518538 F3P13726 295 aa21.64■■□□□ 1.05
VEGFA-217ENST00000518538 ATP1B2P14415 290 aaPredicted RBP21.64■■□□□ 1.05
VEGFA-217ENST00000518538 SLC2A4P14672 509 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms