RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 OR4C3Q8NH37 302 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 C2CD4CQ8TF44 421 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 COG1Q8WTW3 980 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC38A5Q8WUX1 472 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 TRIM43Q96BQ3 446 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 PELI1Q96FA3 418 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC47A1Q96FL8 570 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 CDK5RAP3Q96JB5 506 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 FAR2Q96K12 515 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 OLFM1Q99784 485 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 PAAF1Q9BRP4 392 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 MAK16Q9BXY0 300 aaKnown RBP-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC13A1Q9BZW2 595 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 CXorf56Q9H5V9 222 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 ARNT2Q9HBZ2 717 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 APOBEC3GQ9HC16 384 aaKnown RBP-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 STAU2Q9NUL3 570 aaKnown RBP eCLIP-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 PTTG2Q9NZH5 202 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 RGS17Q9UGC6 210 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC12A4Q9UP95 1085 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 RFNGQ9Y644 331 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 PTPRCP08575 1304 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 COL22A1Q8NFW1 1626 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 RLFQ13129 1914 aa-0.93□□□□□ -2.56
RNU6-542P-201ENST00000516405 CCDC88CQ9P219 2028 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 A0A088AWK7 358 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 A0A0G2JNG1 304 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 MED19A0JLT2 244 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 E9PAM4 449 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 H0YIN7 160 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 DLGAP1O14490 977 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 TNFSF11O14788 317 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 STBD1O95210 358 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 GPIP06744 558 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 DCNP07585 359 aaKnown RBP-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 TFPIP10646 304 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 UMPSP11172 480 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 G6PDP11413 515 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 GPX3P22352 226 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 ERCC5P28715 1186 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 ATICP31939 592 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 PAX9P55771 341 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC18A2Q05940 514 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 OS9Q13438 667 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 FGL2Q14314 439 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 KIR2DS5Q14953 304 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 TAF9Q16594 264 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 SOWAHAQ2M3V2 549 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 PLEKHG6Q3KR16 790 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 MMEL1Q495T6 779 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 FAM182AQ5T1J6 154 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 PRR9Q5T870 116 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 FRG2Q64ET8 278 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 ANKRD40Q6AI12 368 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 FAAH2Q6GMR7 532 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 ANKRD54Q6NXT1 300 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 USP45Q70EL2 814 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 TAOK1Q7L7X3 1001 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 HAUS6Q7Z4H7 955 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 DENND1CQ8IV53 801 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 OR4N5Q8IXE1 308 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 METTL4Q8N3J2 472 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 PSPC1Q8WXF1 523 aaKnown RBP-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 UBXN4Q92575 508 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 RNF183Q96D59 192 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 ATXN7L3BQ96GX2 97 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 FAXDC2Q96IV6 333 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZNF641Q96N77 438 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 TEFMQ96QE5 360 aaKnown RBP-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC12A5Q9H2X9 1139 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 TRPC7Q9HCX4 862 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 ECHDC1Q9NTX5 307 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 MKS1Q9NXB0 559 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 GRHL1Q9NZI5 618 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 NDRG3Q9UGV2 375 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 ATP8A1Q9Y2Q0 1164 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 NFE2L3Q9Y4A8 694 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 PCDHGB5Q9Y5G0 923 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 CACNA1EQ15878 2313 aa-0.94□□□□□ -2.56
RNU6-542P-201ENST00000516405 TENM4Q6N022 2769 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 ICE1Q9Y2F5 2266 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 CELSR1Q9NYQ6 3014 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 IGLV4-3A0A075B6K6 122 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 LOC105371242A0A075B767 164 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 MTMR11A4FU01 709 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 TMEM247A6NEH6 219 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 TAF4O00268 1085 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 XPOTO43592 962 aaKnown RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 PDE8AO60658 829 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 IGSF3O75054 1194 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 NDUFB4O95168 129 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 CSPG5O95196 566 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 ZRANB2O95218 330 aaKnown RBP eCLIP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 HSD3B1P14060 373 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 CDK11BP21127 795 aaKnown RBP-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 MCCP23508 829 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 CENPAP49450 140 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 OAZ1P54368 228 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 SLC12A3P55017 1021 aa-0.95□□□□□ -2.56
RNU6-542P-201ENST00000516405 FAM3BP58499 235 aaPredicted RBP-0.95□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms