RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 QDPRP09417 244 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 TSPY4P0CV99 314 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 TSPY10P0CW01 314 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 MUTP22033 750 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 MCM3P25205 808 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 EEF1DP29692 281 aaKnown RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 PPARGP37231 505 aaPredicted RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 MSH2P43246 934 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 CLCNKAP51800 687 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 PRAMEP78395 509 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 DDR1Q08345 913 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 GOLGA8DPQ0D2H9 430 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 KRT71Q3SY84 523 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 TCP11X2Q5H9J9 407 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 FRG2Q64ET8 278 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 KCTD18Q6PI47 426 aaPredicted RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 SARM1Q6SZW1 724 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 UNQ6126/PRO20091Q6UXV3 157 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 B3GNT6Q6ZMB0 384 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 FAM43BQ6ZT52 329 aaPredicted RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 TUBA1AQ71U36 451 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 TAOK1Q7L7X3 1001 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 ADGRA1Q86SQ6 560 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 CREBRFQ8IUR6 639 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 ADGRF2Q8IZF7 708 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 C17orf53Q8N3J3 647 aaPredicted RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 CADM4Q8NFZ8 388 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 SORCS1Q8WY21 1168 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 TANKQ92844 425 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 ARHGEF2Q92974 986 aaKnown RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 FAM149B1Q96BN6 582 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 TUBA1CQ9BQE3 449 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 TEX12Q9BXU0 123 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 MRPL9Q9BYD2 267 aaKnown RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 IFIH1Q9BYX4 1025 aaKnown RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 TKTL2Q9H0I9 626 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 KCNN2Q9H2S1 579 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 SMARCAD1Q9H4L7 1026 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 SDF2L1Q9HCN8 221 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 SLC35C2Q9NQQ7 365 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 KLHL1Q9NR64 748 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 ABCF3Q9NUQ8 709 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 MRGBPQ9NV56 204 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 CWC25Q9NXE8 425 aaPredicted RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 ABI3Q9P2A4 366 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 MARCH4Q9P2E8 410 aaPredicted RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 CORO1CQ9ULV4 474 aaPredicted RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 ERVK-11Q9UQG0 969 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 VDAC3Q9Y277 283 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 KCNE2Q9Y6J6 123 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 PLEKHH2Q8IVE3 1493 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 AGLP35573 1532 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.19□□□□□ -1.9
HERC4-215ENST00000515753 ARHGEF12Q9NZN5 1544 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 KIAA1107Q9UPP5 1409 aa3.19□□□□□ -1.9
HERC4-215ENST00000515753 SOS1Q07889 1333 aaPredicted RBP3.19□□□□□ -1.9
HERC4-215ENST00000515753 SAMD9Q5K651 1589 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 LRRC53A6NM62 1247 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 MYO1GB0I1T2 1018 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 ZNF587BE7ETH6 402 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 PI4K2BG5E9Z4 385 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 TGFB1I1O43294 461 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 BUB3O43684 328 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 GJB3O75712 270 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 EIF2S1P05198 315 aaKnown RBP3.18□□□□□ -1.9
HERC4-215ENST00000515753 CYC1P08574 325 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 USP8P40818 1118 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 LMAN1P49257 510 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 RAD23AP54725 363 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 HNRNPH2P55795 449 aaKnown RBP3.18□□□□□ -1.9
HERC4-215ENST00000515753 NEXNQ0ZGT2 675 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 OLIG2Q13516 323 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 FGFBP1Q14512 234 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 KYNUQ16719 465 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 C2orf68Q2NKX9 166 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 ALG11Q2TAA5 492 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 SOWAHCQ53LP3 525 aaPredicted RBP3.18□□□□□ -1.9
HERC4-215ENST00000515753 C1orf141Q5JVX7 400 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 PAPPA-AS1Q5QFB9 102 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 GARNL3Q5VVW2 1013 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 GGNBP1Q5YKI7 109 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 MEX3BQ6ZN04 569 aaKnown RBP3.18□□□□□ -1.9
HERC4-215ENST00000515753 GET4Q7L5D6 327 aaPredicted RBP3.18□□□□□ -1.9
HERC4-215ENST00000515753 EXOC3L1Q86VI1 746 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 TDRPQ86YL5 185 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 DSELQ8IZU8 1212 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 WDTC1Q8N5D0 677 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 FRMD1Q8N878 549 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 POMGNT2Q8NAT1 580 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 KCTD6Q8NC69 237 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 ZNF653Q96CK0 615 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 PABPC5Q96DU9 382 aaKnown RBP3.18□□□□□ -1.9
HERC4-215ENST00000515753 PIP5K1AQ99755 562 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 FTOQ9C0B1 505 aaKnown RBP eCLIP3.18□□□□□ -1.9
HERC4-215ENST00000515753 SIL1Q9H173 461 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 EVA1AQ9H8M9 152 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 HINT3Q9NQE9 182 aaKnown RBP3.18□□□□□ -1.9
HERC4-215ENST00000515753 GIMAP4Q9NUV9 329 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 MRPL15Q9P015 296 aaKnown RBP3.18□□□□□ -1.9
HERC4-215ENST00000515753 AAR2Q9Y312 384 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms