RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CYP2A6P11509 494 aaPredicted RBP14.78□□□□□ -0.04
VCAN-211ENST00000513984 ARSAP15289 507 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 VIPR1P32241 457 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 GAB4Q2WGN9 574 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 WASHC2DQ5SRD0 308 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 POU5F2Q8N7G0 328 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 CEP70Q8NHQ1 597 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 LKAAEAR1Q8TD35 194 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 MAGEC3Q8TD91 643 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 HCAR2Q8TDS4 363 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 NKX2-4Q9H2Z4 354 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 TRPV4Q9HBA0 871 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 ZDHHC3Q9NYG2 299 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 GDE1Q9NZC3 331 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 IL36AQ9UHA7 158 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 IGLV3-16A0A075B6K0 115 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 UPK3BL1B0FP48 263 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 UPK3BL2E5RIL1 263 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 COX4I1P13073 169 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 NFKBIAP25963 317 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 EEF1DP29692 281 aaKnown RBP14.78□□□□□ -0.04
VCAN-211ENST00000513984 NSG1P42857 185 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 HK3P52790 923 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 CDH13P55290 713 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 SH3BP2P78314 561 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 ARSIQ5FYB1 569 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 LRRC73Q5JTD7 316 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 RARS2Q5T160 578 aaKnown RBP14.78□□□□□ -0.04
VCAN-211ENST00000513984 ANKS6Q68DC2 871 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 NXNQ6DKJ4 435 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 ADAMTSL2Q86TH1 951 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 GPSM1Q86YR5 675 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 PELI3Q8N2H9 469 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 CLDN19Q8N6F1 224 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 ULK4Q96C45 1275 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 LATS2Q9NRM7 1088 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 NUDT4Q9NZJ9 180 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 PKD2L2Q9NZM6 624 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 DKK3Q9UBP4 350 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 FIS1Q9Y3D6 152 aa14.78□□□□□ -0.04
VCAN-211ENST00000513984 CDH23Q9H251 3354 aa14.77□□□□□ -0.04
VCAN-211ENST00000513984 HEPACAM2A8MVW5 462 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 SLC25A14O95258 325 aaPredicted RBP14.77□□□□□ -0.05
VCAN-211ENST00000513984 TSPAN8P19075 237 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 PIK3R1P27986 724 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 PGM1P36871 562 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 RGS4P49798 205 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 RAP1GDS1P52306 607 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 DCDC1P59894 354 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 CLCQ05315 142 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 LCP2Q13094 533 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 ARHGEF7Q14155 803 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 UGT3A2Q3SY77 523 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 ATP13A5Q4VNC0 1218 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 ZNF805Q5CZA5 627 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 GPRC6AQ5T6X5 926 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 PPP2R2DQ66LE6 453 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 SBSNQ6UWP8 590 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 CYHR1Q6ZMK1 362 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 RFLNAQ6ZTI6 216 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 CHSY3Q70JA7 882 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 GPR149Q86SP6 731 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 CLYBLQ8N0X4 340 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 ZNF483Q8TF39 744 aaPredicted RBP14.77□□□□□ -0.05
VCAN-211ENST00000513984 NSUN5Q96P11 429 aaKnown RBP14.77□□□□□ -0.05
VCAN-211ENST00000513984 CATSPER2Q96P56 530 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 FAM83CQ9BQN1 747 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 EBF3Q9H4W6 596 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 DENND2DQ9H6A0 471 aaPredicted RBP14.77□□□□□ -0.05
VCAN-211ENST00000513984 MRGBPQ9NV56 204 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 ELOVL2Q9NXB9 296 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 NFKBIL1Q9UBC1 381 aaPredicted RBP14.77□□□□□ -0.05
VCAN-211ENST00000513984 CEP290O15078 2479 aa14.77□□□□□ -0.05
VCAN-211ENST00000513984 EPOPA6NHQ4 379 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 TM7SF2O76062 418 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 TIMP2P16035 220 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 FCARP24071 287 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 ST8SIA6P61647 398 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 MXRA7P84157 204 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 TGFBIQ15582 683 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 CRY1Q16526 586 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 TMEM198Q66K66 360 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 CLEC6AQ6EIG7 209 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 GET4Q7L5D6 327 aaPredicted RBP14.76□□□□□ -0.05
VCAN-211ENST00000513984 ZBTB2Q8N680 514 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 DTX3LQ8TDB6 740 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 AGAP11Q8TF27 550 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 ZFYVE19Q96K21 471 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 LENG8Q96PV6 779 aaPredicted RBP14.76□□□□□ -0.05
VCAN-211ENST00000513984 COPS8Q99627 209 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 MTG2Q9H4K7 406 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 MID1IP1Q9NPA3 183 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 PCDH12Q9NPG4 1184 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 SPATS2LQ9NUQ6 558 aaKnown RBP14.76□□□□□ -0.05
VCAN-211ENST00000513984 SMOXQ9NWM0 555 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 KLHL42Q9P2K6 505 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 PCTPQ9UKL6 214 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 OTOL1A6NHN0 477 aaPredicted RBP14.76□□□□□ -0.05
VCAN-211ENST00000513984 MEI4A8MW99 385 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 PPP6CO00743 305 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms