RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 Q6ZVU0 165 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 CILP2Q8IUL8 1156 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 DHRSXQ8N5I4 330 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 AADATQ8N5Z0 425 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 APOLD1Q96LR9 279 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 PANX1Q96RD7 426 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 OSBPL6Q9BZF3 934 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 DENND2DQ9H6A0 471 aaPredicted RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 LRTM1Q9HBL6 345 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 DYTNA2CJ06 578 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 PER2O15055 1255 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 TEX28O15482 410 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 LRATO95237 230 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 CLDN9O95484 217 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 DYNC1I2Q13409 638 aaKnown RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 IL23RQ5VWK5 629 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 GRASPQ7Z6J2 395 aaPredicted RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 SCD5Q86SK9 330 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 ZNF614Q8N883 585 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 H2AFY2Q9P0M6 372 aaPredicted RBP12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 FBXL21Q9UKT6 434 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 PHF24Q9UPV7 400 aa12.99□□□□□ -0.33
PCDHA4-202ENST00000512229 CCDC85CA6NKD9 419 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 IQCF5A8MTL0 148 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 RFXANKO14593 260 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 STC2O76061 302 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 RALGPS1Q5JS13 557 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 ZNF549Q6P9A3 640 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 PAGE2Q7Z2X7 111 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 CYP4Z1Q86W10 505 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 DACT3Q96B18 629 aaPredicted RBP12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 RETREG1Q9H6L5 497 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 WNT6Q9Y6F9 365 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 TMEM189-UBE2V1I3L0A0 370 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 SIX3O95343 332 aaPredicted RBP12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 GTF2H2Q13888 395 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 PLEKHG6Q3KR16 790 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 IRGCQ6NXR0 463 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 GTF2H2CQ6P1K8 395 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 FAM124AQ86V42 546 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 KCNN1Q92952 543 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 HHIPL1Q96JK4 782 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 FCRL3Q96P31 734 aaPredicted RBP12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 CXCL16Q9H2A7 254 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 A8MT66 165 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 A8MUI8 341 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 CLDN7O95471 211 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 CNPP09543 421 aaKnown RBP12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 KELP23276 732 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 RPL3P39023 403 aaKnown RBP12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 PTPRCAPQ14761 206 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 TEAD2Q15562 447 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 GSTA3Q16772 222 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 VPS26BQ4G0F5 336 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 PLEKHG4Q58EX7 1191 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 LY6G5CQ5SRR4 150 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 EMC10Q5UCC4 262 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 C16orf87Q6PH81 154 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 TMEM220Q6QAJ8 160 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 CYP20A1Q6UW02 462 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 CMTR2Q8IYT2 770 aaKnown RBP12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 PGAM4Q8N0Y7 254 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 ZNF276Q8N554 614 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 MRGPRX2Q96LB1 330 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 AARSD1Q9BTE6 412 aaKnown RBP12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 CADM1Q9BY67 442 aaKnown RBP12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 RAD21L1Q9H4I0 556 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 IMP3Q9NV31 184 aaKnown RBP12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 KLHL28Q9NXS3 571 aa12.98□□□□□ -0.33
PCDHA4-202ENST00000512229 PIP5K1BO14986 540 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 TYRP14679 529 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 STC1P52823 247 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 HERVK_113P63132 956 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 TMED1Q13445 227 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 CHRNA6Q15825 494 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 MYLK3Q32MK0 819 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 INTS11Q5TA45 600 aaKnown RBP12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 BRAT1Q6PJG6 821 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 RINLQ6ZS11 566 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 TPRG1Q6ZUI0 275 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 C17orf64Q86WR6 236 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 MICU2Q8IYU8 434 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 CLDN19Q8N6F1 224 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 OR14C36Q8NHC7 312 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ABTB1Q969K4 478 aaPredicted RBP12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ERVK-6Q9BXR3 956 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 MRM3Q9HC36 420 aaKnown RBP12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 CSNK1G1Q9HCP0 422 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 CDH22Q9UJ99 828 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ERVW-1Q9UQF0 538 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 DHRS12A0PJE2 317 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ENO4A6NNW6 628 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ISM1B1AKI9 464 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 LEFTY2O00292 366 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ALDOAP04075 364 aaKnown RBP12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 FGFR3P22607 806 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 CLK1P49759 484 aaKnown RBP12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ARSIQ5FYB1 569 aa12.97□□□□□ -0.33
PCDHA4-202ENST00000512229 ATAD3BQ5T9A4 648 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms