RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 HHEXQ03014 270 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 TMEM115Q12893 351 aaPredicted RBP13.1□□□□□ -0.31
RNF4-215ENST00000511843 MSLNQ13421 630 aaPredicted RBP13.1□□□□□ -0.31
RNF4-215ENST00000511843 SNX1Q13596 522 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 C16orf72Q14CZ0 275 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.1□□□□□ -0.31
RNF4-215ENST00000511843 GPRC6AQ5T6X5 926 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 MEI1Q5TIA1 1274 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 IYDQ6PHW0 289 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 LRRC69Q6ZNQ3 347 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 PDZD3Q86UT5 571 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 PIM3Q86V86 326 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 SLC13A5Q86YT5 568 aaPredicted RBP13.1□□□□□ -0.31
RNF4-215ENST00000511843 JAMLQ86YT9 394 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 TRAPPC5Q8IUR0 188 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 SPACA3Q8IXA5 215 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 LSMEM2Q8N112 164 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 RASGEF1AQ8N9B8 481 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 CCDC112Q8NEF3 446 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 GRAMD1AQ96CP6 724 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 CCDC74BQ96LY2 380 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 STRADBQ9C0K7 418 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 ZMYND15Q9H091 742 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 THSD1Q9NS62 852 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 LOXL2Q9Y4K0 774 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 PCDHGA8Q9Y5G5 932 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 SDK2Q58EX2 2172 aa13.1□□□□□ -0.31
RNF4-215ENST00000511843 ZFYVE26Q68DK2 2539 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 IGHV5-10-1A0A0J9YXX1 117 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 CCDC78A2IDD5 438 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 OR2AG2A6NM03 316 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 CDRT15L2A8MXV6 281 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 KMOO15229 486 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 LIASO43766 372 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 VEGFDO43915 354 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 PRAMEF1O95521 474 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 RPL10P27635 214 aaKnown RBP13.09□□□□□ -0.31
RNF4-215ENST00000511843 PBLDP30039 288 aaPredicted RBP13.09□□□□□ -0.31
RNF4-215ENST00000511843 GPR3P46089 330 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 FASLGP48023 281 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 CTSCP53634 463 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 DRG2P55039 364 aaKnown RBP13.09□□□□□ -0.31
RNF4-215ENST00000511843 ERVPABLB-1P60509 514 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 TLE3Q04726 772 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 PEX6Q13608 980 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 RPS6KA1Q15418 735 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 TAF1AQ15573 450 aaPredicted RBP13.09□□□□□ -0.31
RNF4-215ENST00000511843 PARP6Q2NL67 630 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 KCTD11Q693B1 232 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 DET1Q7L5Y6 550 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 C11orf96Q7Z7L8 435 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 KLHDC8BQ8IXV7 354 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 SLC38A3Q99624 504 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 TBC1D10AQ9BXI6 508 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 WDR70Q9NW82 654 aa13.09□□□□□ -0.31
RNF4-215ENST00000511843 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.09□□□□□ -0.31
RNF4-215ENST00000511843 PTPRQQ9UMZ3 2332 aa13.08□□□□□ -0.31
RNF4-215ENST00000511843 FAM208BQ5VWN6 2430 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 C2orf81A6NN90 581 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 PDZK1P1A8MUH7 402 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 GPR89AB7ZAQ6 455 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 KLK10O43240 276 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 IFNB1P01574 187 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 ITGA2BP08514 1039 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 JMJD7P0C870 316 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 GPR89BP0CG08 455 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 CCL4P13236 92 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 ETS1P14921 441 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 BRAFP15056 766 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 SLC5A2P31639 672 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 AKT1P31749 480 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 ZNF140P52738 457 aaPredicted RBP13.08□□□□□ -0.32
RNF4-215ENST00000511843 MAPK10P53779 464 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 ITGA9Q13797 1035 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 GTF2H3Q13889 308 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 SEPT6Q14141 434 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 POU6F1Q14863 301 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 OASLQ15646 514 aaKnown RBP13.08□□□□□ -0.32
RNF4-215ENST00000511843 SNAP47Q5SQN1 464 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 IGF2-ASQ6U949 168 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 FAM83HQ6ZRV2 1179 aaPredicted RBP13.08□□□□□ -0.32
RNF4-215ENST00000511843 SLC9B2Q86UD5 537 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 BEND7Q8N7W2 519 aaPredicted RBP13.08□□□□□ -0.32
RNF4-215ENST00000511843 GLIS1Q8NBF1 620 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 ZNF248Q8NDW4 579 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 DDHD1Q8NEL9 900 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 ZNF398Q8TD17 642 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 KCNE4Q8WWG9 221 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 DNAJC1Q96KC8 554 aaKnown RBP13.08□□□□□ -0.32
RNF4-215ENST00000511843 TTC25Q96NG3 672 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 TIMM29Q9BSF4 260 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 ZNF624Q9P2J8 865 aaPredicted RBP13.08□□□□□ -0.32
RNF4-215ENST00000511843 CPNE7Q9UBL6 633 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 FAM8A1Q9UBU6 413 aa13.08□□□□□ -0.32
RNF4-215ENST00000511843 PRR19A6NJB7 356 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 OR52A4PA6NMU1 304 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 A8MU76 341 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 LDB2O43679 373 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 PRAMEF10O60809 474 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms