RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ARMCX2Q7L311 632 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 PRSS45Q7RTY3 260 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 MON1AQ86VX9 555 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 FAM217AQ8IXS0 508 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 ZDHHC23Q8IYP9 409 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 GHDCQ8N2G8 530 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 CPXM2Q8N436 756 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 LRRC57Q8N9N7 239 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 PCYOX1LQ8NBM8 494 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 TNIP2Q8NFZ5 429 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 OR4N2Q8NGD1 307 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 B3GNT4Q9C0J1 378 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 INTS2Q9H0H0 1204 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 HIPK2Q9H2X6 1198 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 ENTPD7Q9NQZ7 604 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 ZBTB40Q9NUA8 1239 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 DECR2Q9NUI1 292 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 BEX4Q9NWD9 120 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 BABAM1Q9NWV8 329 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 PPP1R14DQ9NXH3 145 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 HCN3Q9P1Z3 774 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 PLEKHB1Q9UF11 243 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 CDH22Q9UJ99 828 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 ARHGAP26Q9UNA1 814 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 RAP2CQ9Y3L5 183 aa3.7□□□□□ -1.82
TOPBP1-208ENST00000511439 IGLV5-39A0A0G2JS06 123 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 KANSL1LA0AUZ9 987 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 EME2A4GXA9 379 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 GAGE12JA6NER3 117 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 C4orf47A7E2U8 309 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 KIF1CO43896 1103 aaKnown RBP3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 CEP104O60308 925 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 ZC3H11AO75152 810 aaKnown RBP eCLIP3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 FLOT1O75955 427 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 IL1AP01583 271 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 URODP06132 367 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 YWHAQP27348 245 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 ABCD3P28288 659 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 BTDP43251 543 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 BLKP51451 505 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 ARSFP54793 590 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 CASP6P55212 293 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 NANOS2P60321 138 aaKnown RBP3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 NEXNQ0ZGT2 675 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 ME3Q16798 604 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 TAF1BQ53T94 588 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 Q5PR19 223 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 NUGGCQ68CJ6 796 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 ACAD10Q6JQN1 1059 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 SLC22A25Q6T423 547 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 IL20RBQ6UXL0 311 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 TRAPPC11Q7Z392 1133 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 SERPINA11Q86U17 422 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 TMC8Q8IU68 726 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 PLD5Q8N7P1 536 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 FAM133AQ8N9E0 248 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 DNAAF1Q8NEP3 725 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 DBF4BQ8NFT6 615 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 BICD2Q8TD16 824 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 TMEM170AQ8WVE7 144 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 RFFLQ8WZ73 363 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 SEPT8Q92599 483 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 INPP5DQ92835 1189 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 ZUFSPQ96AP4 578 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 WDR77Q9BQA1 342 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 ARRDC1-AS1Q9H2J1 176 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 SLC32A1Q9H598 525 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 PRORYQ9H606 182 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 TBC1D14Q9P2M4 693 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 SEL1LQ9UBV2 794 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 NUDCQ9Y266 331 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 NOTCH4Q99466 2003 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 DNHD1Q96M86 4753 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 FRMPD4Q14CM0 1322 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 RAD50Q92878 1312 aa3.69□□□□□ -1.82
TOPBP1-208ENST00000511439 NBPF19A0A087WUL8 3843 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 COL5A1P20908 1838 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 TSC2P49815 1807 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 MYO10Q9HD67 2058 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 HSPB6O14558 160 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 SMAD6O43541 496 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 F9P00740 461 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 GH2P01242 217 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 MYZAPP0CAP1 466 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 TNFAIP3P21580 790 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 TBXAS1P24557 533 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 KRT9P35527 623 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 GGT5P36269 586 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 PAFAH1B1P43034 410 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 RPS9P46781 194 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 CENPAP49450 140 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 RASSF2P50749 326 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 SLC18A2Q05940 514 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 PTPN14Q15678 1187 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 SHROOM1Q2M3G4 852 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 CCDC57Q2TAC2 916 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 ZNF667Q5HYK9 610 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 TMEM71Q6P5X7 295 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 PARM1Q6UWI2 310 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms