RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 OBP2AQ9NY56 170 aa12.77□□□□□ -0.37
HMGB2-205ENST00000511316 ABCD2Q9UBJ2 740 aa12.77□□□□□ -0.37
HMGB2-205ENST00000511316 ZNF318Q5VUA4 2279 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 OTOL1A6NHN0 477 aaPredicted RBP12.76□□□□□ -0.37
HMGB2-205ENST00000511316 F5H423 210 aaPredicted RBP12.76□□□□□ -0.37
HMGB2-205ENST00000511316 H3BSA7 217 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 PHGDHO43175 533 aaKnown RBP12.76□□□□□ -0.37
HMGB2-205ENST00000511316 IMPDH1P20839 514 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.377e-26■■■□□ 17.1
HMGB2-205ENST00000511316 EMP3P54852 163 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 TAF12Q16514 161 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 TMEM31Q5JXX7 168 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 BRMS1LQ5PSV4 323 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 PATL1Q86TB9 770 aaKnown RBP12.76□□□□□ -0.37
HMGB2-205ENST00000511316 CUZD1Q86UP6 607 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 SLC41A1Q8IVJ1 513 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 ZNF687Q8N1G0 1237 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 ATPAF2Q8N5M1 289 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 CENPNQ96H22 339 aaPredicted RBP12.76□□□□□ -0.37
HMGB2-205ENST00000511316 CEP41Q9BYV8 373 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 OCEL1Q9H607 264 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 NMUR1Q9HB89 426 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 POPDC3Q9HBV1 291 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 TRPV5Q9NQA5 729 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 ACTR3BQ9P1U1 418 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 FBXO5Q9UKT4 447 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 CNOT6Q9ULM6 557 aaKnown RBP12.76□□□□□ -0.37
HMGB2-205ENST00000511316 SCML2Q9UQR0 700 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 C7orf72A4D263 438 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 AKAP10O43572 662 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 PI15O43692 258 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 GREM1O60565 184 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 USP12O75317 370 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 MATN4O95460 622 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 NPPAP01160 153 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 IDO1P14902 403 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 ARCN1P48444 511 aaKnown RBP12.76□□□□□ -0.37
HMGB2-205ENST00000511316 PPP3CCP48454 512 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 FZD5Q13467 585 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 TMEM198Q66K66 360 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 ABRAXAS1Q6UWZ7 409 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 CLYBLQ8N0X4 340 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 SMYD1Q8NB12 490 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 LRTOMTQ8WZ04 291 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 OVCA2Q8WZ82 227 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 MRPS31Q92665 395 aaKnown RBP12.76□□□□□ -0.37
HMGB2-205ENST00000511316 NXNL1Q96CM4 212 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 NRBF2Q96F24 287 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 ZFYVE19Q96K21 471 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 IL12RB2Q99665 862 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 DOK1Q99704 481 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 TRMT61BQ9BVS5 477 aaKnown RBP12.76□□□□□ -0.37
HMGB2-205ENST00000511316 TRIM54Q9BYV2 358 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 ARNT2Q9HBZ2 717 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 GLOD4Q9HC38 313 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 TREX1Q9NSU2 369 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 PKD2L2Q9NZM6 624 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 TRPM5Q9NZQ8 1165 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 GMIPQ9P107 970 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 ZMYM5Q9UJ78 669 aa12.76□□□□□ -0.37
HMGB2-205ENST00000511316 G3BP2Q9UN86 482 aaKnown RBP12.76□□□□□ -0.37
HMGB2-205ENST00000511316 DHRS12A0PJE2 317 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 MATN3O15232 486 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 TBX18O95935 607 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 JCHAINP01591 159 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 FGF4P08620 206 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 HDCP19113 662 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 GLRBP48167 497 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 LEPRP48357 1165 aaKnown RBP12.75□□□□□ -0.37
HMGB2-205ENST00000511316 STARD6P59095 220 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 SLC7A9P82251 487 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 TUBA3CQ13748 450 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 ZNF77Q15935 545 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 NRF1Q16656 503 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 ZNF829Q3KNS6 432 aaPredicted RBP12.75□□□□□ -0.37
HMGB2-205ENST00000511316 SLC44A4Q53GD3 710 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 ARHGAP15Q53QZ3 475 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 NEPROQ6NW34 567 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 GK5Q6ZS86 529 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 GPR180Q86V85 440 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 TXNDC5Q8NBS9 432 aaKnown RBP12.75□□□□□ -0.37
HMGB2-205ENST00000511316 NDRG1Q92597 394 aaKnown RBP12.75□□□□□ -0.37
HMGB2-205ENST00000511316 MAGED4Q96JG8 741 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 FSD1LQ9BXM9 530 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 CCSER2Q9H7U1 834 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 DDIT4Q9NX09 232 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 OR12D3Q9UGF7 316 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 SEPT3Q9UH03 358 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 SH3GLB1Q9Y371 365 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 TRAF6Q9Y4K3 522 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 PATJQ8NI35 1801 aa12.75□□□□□ -0.37
HMGB2-205ENST00000511316 NUP210Q8TEM1 1887 aaPredicted RBP12.75□□□□□ -0.37
HMGB2-205ENST00000511316 COL4A2P08572 1712 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 E2F8A0AVK6 867 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 PRORSD1PA6NEY8 169 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 H0YAE9 185 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 ANGPT2O15123 496 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 COCHO43405 550 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 DNAJB5O75953 348 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 RASAL1O95294 804 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms