RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 PPP1R2P3Q6NXS1 205 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 TMCO3Q6UWJ1 677 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 MCEMP1Q8IX19 187 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 RBM12BQ8IXT5 1001 aaKnown RBP9.24□□□□□ -0.93
NEDD9-211ENST00000508546 SLC34A3Q8N130 599 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 ATPAF2Q8N5M1 289 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 TEX26Q8N6G2 289 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 ADAMTS17Q8TE56 1095 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 RSC1A1Q92681 617 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 PNPLA2Q96AD5 504 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 ZDHHC12Q96GR4 267 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 RUFY1Q96T51 708 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 AGPAT1Q99943 283 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 AKIRIN1Q9H9L7 192 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-211ENST00000508546 LMBRD1Q9NUN5 540 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 POT1Q9NUX5 634 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 SEPT11Q9NVA2 429 aaKnown RBP9.24□□□□□ -0.93
NEDD9-211ENST00000508546 PARVAQ9NVD7 372 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 TAB2Q9NYJ8 693 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 SCHIP1Q9P0W5 487 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-211ENST00000508546 ZNF624Q9P2J8 865 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-211ENST00000508546 ATXN10Q9UBB4 475 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 RARRES3Q9UL19 164 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 SLC5A6Q9Y289 635 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 SIK3Q9Y2K2 1263 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 DOCK10Q96BY6 2186 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 PCM1Q15154 2024 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 SSU72P8A0A1W2PR75 194 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 RGSL1A5PLK6 1076 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 ARGFXA6NJG6 315 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 H3BRJ5 948 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 CHUKO15111 745 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 CLDN7O95471 211 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 CBX6O95503 412 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 ZNF8P17098 575 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 CES1P23141 567 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 SERPINB6P35237 376 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 ARL4AP40617 200 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 PTGIRP43119 386 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 RPL26P61254 145 aaKnown RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 TUBB3Q13509 450 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 IL10RAQ13651 578 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 DPYSL2Q16555 572 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 ZXDCQ2QGD7 858 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 CT47A1Q5JQC4 288 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 FAM199XQ6PEV8 388 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 ABRAXAS1Q6UWZ7 409 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 WASH2PQ6VEQ5 465 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 ZNF517Q6ZMY9 492 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 LRRC49Q8IUZ0 686 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 TRIM48Q8IWZ4 208 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 RHOT1Q8IXI2 618 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 RBMXL3Q8N7X1 1067 aaKnown RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 SIDT2Q8NBJ9 832 aaKnown RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 TTC13Q8NBP0 860 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 UBXN4Q92575 508 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 SLC41A2Q96JW4 573 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 C5orf34Q96MH7 638 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 POLR1EQ9GZS1 481 aaKnown RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 OSGEPL1Q9H4B0 414 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 FAM83DQ9H4H8 585 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 SLC40A1Q9NP59 571 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 NT5MQ9NPB1 228 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 WASH6PQ9NQA3 447 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 KLC4Q9NSK0 619 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 ETNK2Q9NVF9 386 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 ITGB1BP2Q9UKP3 347 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 G3BP2Q9UN86 482 aaKnown RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 RPL26L1Q9UNX3 145 aaKnown RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 ENTPD4Q9Y227 616 aa9.23□□□□□ -0.93
NEDD9-211ENST00000508546 FARSAQ9Y285 508 aaKnown RBP9.23□□□□□ -0.93
NEDD9-211ENST00000508546 IGHV5-51A0A0C4DH38 117 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 C1orf232A0A0U1RR37 186 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 TMEM191CA6NGB0 347 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 MTA2O94776 668 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 MBD3O95983 291 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 PRLP01236 227 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 JCHAINP01591 159 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 BRAFP15056 766 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 FOLR1P15328 257 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 CA4P22748 312 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 AMPD1P23109 780 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 PDE1BQ01064 536 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 ACY1Q03154 408 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 GPR18Q14330 331 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 IHHQ14623 411 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 NR6A1Q15406 480 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 ZRANB3Q5FWF4 1079 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 FKBP15Q5T1M5 1219 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 AGAP9Q5VTM2 703 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 IZUMO3Q5VZ72 239 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 IRGCQ6NXR0 463 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 FAM92BQ6ZTR7 304 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 POLNQ7Z5Q5 900 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 KMT5CQ86Y97 462 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 GLIS1Q8NBF1 620 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 FDCSPQ8NFU4 85 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 CSPG4P5Q96PW8 444 aa9.22□□□□□ -0.93
NEDD9-211ENST00000508546 SMAD5Q99717 465 aaKnown RBP9.22□□□□□ -0.93
NEDD9-211ENST00000508546 TIMM29Q9BSF4 260 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms