RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 APEHP13798 732 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ZNF23P17027 643 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 JAK1P23458 1154 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 CETN2P41208 172 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 VPS41P49754 854 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 DIO1P49895 249 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 BLVRAP53004 296 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 BCAT1P54687 386 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 C21orf59P57076 290 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 RPS3AP61247 264 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ZBTB16Q05516 673 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 WASHC5Q12768 1159 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ORC2Q13416 577 aaPredicted RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 SLC39A6Q13433 755 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 KRR1Q13601 381 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 RAB32Q13637 225 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 SLC29A2Q14542 456 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ASTE1Q2TB18 679 aaPredicted RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ANKDD1AQ495B1 522 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 SMUG1Q53HV7 270 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ACSBG2Q5FVE4 666 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 WDR45BQ5MNZ6 344 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 SULT6B1Q6IMI4 303 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ZFP1Q6P2D0 407 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 TTC27Q6P3X3 843 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ZDHHC24Q6UX98 284 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 STOX1Q6ZVD7 989 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 Q7L0L9 218 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 EPM2AIP1Q7L775 607 aaPredicted RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ARPINQ7Z6K5 226 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 HEATR4Q86WZ0 1026 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 MMAAQ8IVH4 418 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 MB21D2Q8IYB1 491 aaPredicted RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ESX1Q8N693 406 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 GRPEL2Q8TAA5 225 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 HM13Q8TCT9 377 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 GRK7Q8WTQ7 553 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 FAM172AQ8WUF8 416 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 P2RX5Q93086 422 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 VCPIP1Q96JH7 1222 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 CNOT6LQ96LI5 555 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 AK8Q96MA6 479 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 NLRP4Q96MN2 994 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 SIGLEC11Q96RL6 698 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 YME1L1Q96TA2 773 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 RMDN3Q96TC7 470 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ACO2Q99798 780 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 C1orf50Q9BV19 199 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 RNF26Q9BY78 433 aaPredicted RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 RHOBTB2Q9BYZ6 727 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 RBM38Q9H0Z9 239 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 STN1Q9H668 368 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 AS3MTQ9HBK9 375 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ZDHHC18Q9NUE0 388 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 TMEM184CQ9NVA4 438 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 PAG1Q9NWQ8 432 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 PI4KBQ9UBF8 816 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 FETUBQ9UGM5 382 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 PCYOX1Q9UHG3 505 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ATPIF1Q9UII2 106 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 CDH7Q9ULB5 785 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 PHTF1Q9UMS5 762 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 USP22Q9UPT9 525 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 ERVK-11Q9UQG0 969 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 CHKBQ9Y259 395 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 PFASO15067 1338 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 RTL9Q8NET4 1388 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 CENPFP49454 3210 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 TTC3P53804 2025 aa4.6□□□□□ -1.67
PDLIM5-211ENST00000508531 UNC80Q8N2C7 3258 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 FAM25AB3EWG3 89 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 FAM25CB3EWG5 89 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 FAM25GB3EWG6 89 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 GRM8O00222 908 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 RNF103O00237 685 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 ATP2A1O14983 1001 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 VILLO15195 856 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TM9SF1O15321 606 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 KCNQ3O43525 872 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TSPAN9O75954 239 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 KRT36O76013 467 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TM7SF2O76062 418 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 UFL1O94874 794 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 S100BP04271 92 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CALM1P0DP23 149 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CALM2P0DP24 149 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CALM3P0DP25 149 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MYBL1P10243 752 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 KRT5P13647 590 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 P4HA1P13674 534 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 GM2AP17900 193 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CDH2P19022 906 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TAC1P20366 129 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 IL32P24001 234 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CALML3P27482 149 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 PRDX6P30041 224 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CDC25AP30304 524 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 PRKAR1BP31321 381 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms