RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 ACCSLQ4AC99 568 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 RABGAP1LQ5R372 815 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 MPP7Q5T2T1 576 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 C9orf64Q5T6V5 341 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 CCDC181Q5TID7 509 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 FAM72AQ5TYM5 149 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 SFMBT2Q5VUG0 894 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 KIAA1614Q5VZ46 1190 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 PMS2CLQ68D20 193 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 ACAD10Q6JQN1 1059 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 FAM72DQ6L9T8 149 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 CXorf57Q6NSI4 855 aaKnown RBP4.63□□□□□ -1.67
NUP54-206ENST00000508465 SCYL2Q6P3W7 929 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 WDR59Q6PJI9 974 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 LINGO4Q6UY18 593 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 LEKR1Q6ZMV7 388 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 ZNF571Q7Z3V5 609 aaPredicted RBP4.63□□□□□ -1.67
NUP54-206ENST00000508465 FAM72BQ86X60 149 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 ZNF677Q86XU0 584 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 ZDHHC17Q8IUH5 632 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 SLC41A1Q8IVJ1 513 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 CCDC117Q8IWD4 279 aaPredicted RBP4.63□□□□□ -1.67
NUP54-206ENST00000508465 DRC7Q8IY82 874 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 AHI1Q8N157 1196 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 PYROXD2Q8N2H3 581 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 STK40Q8N2I9 435 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 LILRB2Q8N423 598 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.63□□□□□ -1.67
NUP54-206ENST00000508465 C9orf106Q8NAJ2 232 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 MSANTD4Q8NCY6 345 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 OR2I1PQ8NGU4 316 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 ACTRT2Q8TDY3 377 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 PRCCQ92733 491 aaPredicted RBP4.63□□□□□ -1.67
NUP54-206ENST00000508465 NT5C3BQ969T7 300 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 ALG14Q96F25 216 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 BOD1Q96IK1 185 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 NEU1Q99519 415 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 GPR174Q9BXC1 333 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 C1QTNF7Q9BXJ2 289 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 TRIM7Q9C029 511 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 TMEM245Q9H330 911 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 HAUS4Q9H6D7 363 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 GALNT9Q9HCQ5 603 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 ITM2CQ9NQX7 267 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 FOXJ2Q9P0K8 574 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 SUN2Q9UH99 717 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 ACTL7AQ9Y615 435 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 ATXN2Q99700 1313 aaKnown RBP4.63□□□□□ -1.67
NUP54-206ENST00000508465 GVINP1Q7Z2Y8 2422 aa4.63□□□□□ -1.67
NUP54-206ENST00000508465 EML5Q05BV3 1969 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 THADAQ6YHU6 1953 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 A0A0D9SEW6 157 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 TYW5A2RUC4 315 aaKnown RBP4.62□□□□□ -1.67
NUP54-206ENST00000508465 FAM47DPA6NHR8 397 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 SIGLEC16A6NMB1 481 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 C4orf47A7E2U8 309 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 E9PAM4 449 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 RNF103O00237 685 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 MID1O15344 667 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 SMAD6O43541 496 aaKnown RBP4.62□□□□□ -1.67
NUP54-206ENST00000508465 C1QL1O75973 258 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 ACADMP11310 421 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 GPD1P21695 349 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 CD6P30203 668 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 SLC8A1P32418 973 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 ACSL1P33121 698 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 LSP1P33241 339 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 CRHR1P34998 444 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 DNA2P51530 1060 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 METAP1P53582 386 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 GYS2P54840 703 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 HDAC4P56524 1084 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 ST8SIA6P61647 398 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 OGDHQ02218 1023 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 ZNF33AQ06730 810 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 KLHL30Q0D2K2 578 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 DLG2Q15700 870 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 UAP1L1Q3KQV9 507 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 PLEKHG6Q3KR16 790 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 AASDHQ4L235 1098 aaPredicted RBP4.62□□□□□ -1.67
NUP54-206ENST00000508465 BRMS1LQ5PSV4 323 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 STPG1Q5TH74 334 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 DAB2IPQ5VWQ8 1189 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 RWDD4Q6NW29 188 aaKnown RBP4.62□□□□□ -1.67
NUP54-206ENST00000508465 DNAJC24Q6P3W2 148 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 LRRC31Q6UY01 552 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 SLC36A4Q6YBV0 504 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 TRIM72Q6ZMU5 477 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 MON1BQ7L1V2 547 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 C1QL2Q7Z5L3 287 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 PHF13Q86YI8 300 aaPredicted RBP4.62□□□□□ -1.67
NUP54-206ENST00000508465 MMAAQ8IVH4 418 aaKnown RBP4.62□□□□□ -1.67
NUP54-206ENST00000508465 ZNF683Q8IZ20 524 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 MCOLN2Q8IZK6 566 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 CCDC185Q8N715 623 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 OR7D4Q8NG98 312 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 OR2T3Q8NH03 318 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 OR14C36Q8NHC7 312 aa4.62□□□□□ -1.67
NUP54-206ENST00000508465 WFIKKN2Q8TEU8 576 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms