RNA–Protein interactions for RNA: ENST00000506696.1

SNCB-203, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNCB, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-203ENST00000506696 OLIG2Q13516 323 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 TRA2AQ13595 282 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNCB-203ENST00000506696 PTPRCAPQ14761 206 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 TBR1Q16650 682 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 ATP13A5Q4VNC0 1218 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 TEX44Q53QW1 395 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 SIRPB2Q5JXA9 342 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 KDELC1Q6UW63 502 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 PRICKLE2Q7Z3G6 844 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 CCDC50Q8IVM0 306 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 ZNF547Q8IVP9 402 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 UNC5BQ8IZJ1 945 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 TRAM1L1Q8N609 369 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 IPMKQ8NFU5 416 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 TFB1MQ8WVM0 346 aaKnown RBP13.58□□□□□ -0.24
SNCB-203ENST00000506696 TEKT5Q96M29 485 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 PLEKHG4BQ96PX9 1271 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 FAM118BQ9BPY3 351 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 HERPUD2Q9BSE4 406 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 ZSCAN5AQ9BUG6 496 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 HEMGNQ9BXL5 484 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 TSGA10Q9BZW7 698 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 MAGEE1Q9HCI5 957 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 OGFRQ9NZT2 677 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 KLHL8Q9P2G9 620 aaPredicted RBP13.58□□□□□ -0.24
SNCB-203ENST00000506696 SLC30A1Q9Y6M5 507 aa13.58□□□□□ -0.24
SNCB-203ENST00000506696 hCG_1818297A0A087WSY0 165 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 MACROD2A1Z1Q3 448 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 RGSL1A5PLK6 1076 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 OR52A4PA6NMU1 304 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 SLC28A2O43868 658 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 RAD1O60671 282 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 ZNF7P17097 686 aaPredicted RBP13.57□□□□□ -0.24
SNCB-203ENST00000506696 NAP1L1P55209 391 aaKnown RBP13.57□□□□□ -0.24
SNCB-203ENST00000506696 DCDC1P59894 354 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 UBE2IP63279 158 aaKnown RBP13.57□□□□□ -0.24
SNCB-203ENST00000506696 SQSTM1Q13501 440 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 CLCA4Q14CN2 919 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 TAZQ16635 292 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 CLPPQ16740 277 aaPredicted RBP13.57□□□□□ -0.24
SNCB-203ENST00000506696 C11orf63Q6NUN7 778 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 FAM151BQ6UXP7 276 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 SLC9B2Q86UD5 537 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 VSIG1Q86XK7 387 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 REXO1L1PQ8IX06 675 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 ZNF567Q8N184 647 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 TTC30BQ8N4P2 665 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 IL22RA1Q8N6P7 574 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 LRRC57Q8N9N7 239 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 GDAP1Q8TB36 358 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 MRGPRX2Q96LB1 330 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 ARHGAP9Q9BRR9 750 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 STN1Q9H668 368 aaKnown RBP13.57□□□□□ -0.24
SNCB-203ENST00000506696 RMI1Q9H9A7 625 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 TRIM39Q9HCM9 518 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 LZTFL1Q9NQ48 299 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 ZNF624Q9P2J8 865 aaPredicted RBP13.57□□□□□ -0.24
SNCB-203ENST00000506696 PYCARDQ9ULZ3 195 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 GUCA1BQ9UMX6 200 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 PCDHGA3Q9Y5H0 932 aa13.57□□□□□ -0.24
SNCB-203ENST00000506696 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNCB-203ENST00000506696 FLNBO75369 2602 aaKnown RBP13.57□□□□□ -0.24
SNCB-203ENST00000506696 COL6A6A6NMZ7 2263 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 GRID2IPA4D2P6 1211 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 B8ZZF3 427 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.56□□□□□ -0.24
SNCB-203ENST00000506696 J3QKU1 62 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 PSTPIP1O43586 416 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 UGT1A9O60656 530 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 BRAFP15056 766 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 UGT1A6P19224 532 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 UGT1A1P22309 533 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 UGT1A4P22310 534 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 CD82P27701 267 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 PBLDP30039 288 aaPredicted RBP13.56□□□□□ -0.24
SNCB-203ENST00000506696 SLC19A1P41440 591 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 LEPRP48357 1165 aaKnown RBP13.56□□□□□ -0.24
SNCB-203ENST00000506696 SEPHS1P49903 392 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 ATP1A2P50993 1020 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 TFDP2Q14188 446 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 CHRNA6Q15825 494 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 WDR74Q6RFH5 385 aaPredicted RBP13.56□□□□□ -0.24
SNCB-203ENST00000506696 ARHGAP22Q7Z5H3 698 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 DAAM2Q86T65 1068 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 LRRTM4Q86VH4 590 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 TRAPPC5Q8IUR0 188 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 TRIM48Q8IWZ4 208 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 RAVER1Q8IY67 606 aaKnown RBP13.56□□□□□ -0.24
SNCB-203ENST00000506696 CACNA2D3Q8IZS8 1091 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 BLOC1S5Q8TDH9 187 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 RSC1A1Q92681 617 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 RTP4Q96DX8 246 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 TGM7Q96PF1 710 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 QKIQ96PU8 341 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNCB-203ENST00000506696 DDA1Q9BW61 102 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 UGT1A7Q9HAW7 530 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 UGT1A10Q9HAW8 530 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 UGT1A8Q9HAW9 530 aa13.56□□□□□ -0.24
SNCB-203ENST00000506696 PDP2Q9P2J9 529 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms