RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 LRRTM4Q86VH4 590 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 TMEM126BQ8IUX1 230 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 SSC4DQ8WTU2 575 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 CPLX3Q8WVH0 158 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 ZDHHC12Q96GR4 267 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 PSMG3-AS1Q96PY0 264 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 ADGRE3Q9BY15 652 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 TRIM55Q9BYV6 548 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 SPRY4Q9C004 299 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 SLC7A5P2Q9GIP4 190 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 BRD8Q9H0E9 1235 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 THAP2Q9H0W7 228 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 CARD9Q9H257 536 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 ACTL8Q9H568 366 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 ZNF768Q9H5H4 540 aaKnown RBP8.12□□□□□ -1.11
SNF8-204ENST00000506104 ZFYVE1Q9HBF4 777 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 SLAMF7Q9NQ25 335 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 LHX9Q9NQ69 397 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 SIDT1Q9NXL6 827 aaKnown RBP8.12□□□□□ -1.11
SNF8-204ENST00000506104 DTLQ9NZJ0 730 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 OGFRQ9NZT2 677 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 CNOT6Q9ULM6 557 aaKnown RBP8.12□□□□□ -1.11
SNF8-204ENST00000506104 G3BP2Q9UN86 482 aaKnown RBP8.12□□□□□ -1.11
SNF8-204ENST00000506104 PSMD13Q9UNM6 376 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 PPIL1Q9Y3C6 166 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 MED13Q9UHV7 2174 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 UBA6A0AVT1 1052 aaPredicted RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 F5H423 210 aaPredicted RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 MYO1FO00160 1098 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 KCNK1O00180 336 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 ZNF185O15231 689 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 GPR37O15354 613 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 CDK14O94921 469 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 TIAF1O95411 115 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 SERPINC1P01008 464 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 EBLN1P0CF75 366 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 GZMAP12544 262 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 TNNT1P13805 278 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 VCLP18206 1134 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 XRCC1P18887 633 aaPredicted RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 CCNCP24863 283 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 COL8A1P27658 744 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 TNNT3P45378 269 aaPredicted RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 ARCN1P48444 511 aaKnown RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 PPP1CAP62136 330 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 UBE2IP63279 158 aaKnown RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 GALNT2Q10471 571 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 RAPSNQ13702 412 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 IL11RAQ14626 422 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 EIF2S3LQ2VIR3 472 aaKnown RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 PRR30Q53SZ7 412 aaPredicted RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 ODF2Q5BJF6 829 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 HENMT1Q5T8I9 393 aaKnown RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 NCBP2-AS2Q69YL0 99 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 CYB5D1Q6P9G0 228 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 B4GALNT4Q76KP1 1039 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 ADGRG6Q86SQ4 1221 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 TEX26Q8N6G2 289 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 GPR26Q8NDV2 337 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 TEKT4Q8WW24 435 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 GLYATL1Q969I3 302 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 AGAP3Q96P47 875 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 WDR24Q96S15 920 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 TRIM39Q9HCM9 518 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 SOHLH2Q9NX45 425 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 CTTNBP2NLQ9P2B4 639 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 ZNF624Q9P2J8 865 aaPredicted RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 SLC23A2Q9UGH3 650 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 ZNF711Q9Y462 761 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 HEY1Q9Y5J3 304 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 CFAP20Q9Y6A4 193 aaKnown RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 SPTBN1Q01082 2364 aaKnown RBP8.11□□□□□ -1.11
SNF8-204ENST00000506104 SPTBP11277 2137 aa8.11□□□□□ -1.11
SNF8-204ENST00000506104 MDC1Q14676 2089 aaKnown RBP8.1□□□□□ -1.11
SNF8-204ENST00000506104 PIKFYVEQ9Y2I7 2098 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 IGHV5-51A0A0C4DH38 117 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 ANKRD66B4E2M5 251 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 SEMA7AO75326 666 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 PMPCBO75439 489 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 PRLP01236 227 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 C9P02748 559 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 ANKRD34CP0C6C1 535 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 FOLR1P15328 257 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 MX2P20592 715 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 PTGIRP43119 386 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 CAPZBP47756 277 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 RPL26P61254 145 aaKnown RBP8.1□□□□□ -1.11
SNF8-204ENST00000506104 GBE1Q04446 702 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 MRPL49Q13405 166 aaKnown RBP8.1□□□□□ -1.11
SNF8-204ENST00000506104 XRCC4Q13426 336 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 SEMA5AQ13591 1074 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 DPYSL3Q14195 570 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 KRT33BQ14525 404 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 IHHQ14623 411 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 GPR19Q15760 415 aa8.1□□□□□ -1.11
SNF8-204ENST00000506104 DNTTIP2Q5QJE6 756 aaKnown RBP8.1□□□□□ -1.11
SNF8-204ENST00000506104 E4F1Q66K89 784 aaPredicted RBP8.1□□□□□ -1.11
SNF8-204ENST00000506104 CAPRIN2Q6IMN6 1127 aaKnown RBP8.1□□□□□ -1.11
SNF8-204ENST00000506104 PWWP2BQ6NUJ5 590 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms