RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SYT17Q9BSW7 474 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 LRMDAQ9H2I8 198 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 EBF2Q9HAK2 575 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 NSMCE4AQ9NXX6 385 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 SEC63Q9UGP8 760 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 TSPYL4Q9UJ04 414 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 EXO1Q9UQ84 846 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 ZNF711Q9Y462 761 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 PCDHAC2Q9Y5I4 1007 aa3.93□□□□□ -1.78
TOPBP1-204ENST00000505804 A0A1B0GUV1 79 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 TMEM8BA6NDV4 472 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 TMEM189-UBE2V1I3L0A0 370 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 J3QR06 171 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 ZBTB43O43298 467 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 TMCC2O75069 709 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 LDHCP07864 332 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 MMP9P14780 707 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 POLR2CP19387 275 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 BDNFP23560 247 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 USP8P40818 1118 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 IL15P40933 162 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 ERVFC1-1P60608 527 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 RUNX1T1Q06455 604 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 UBE2V1Q13404 147 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 ZNF234Q14588 700 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 MEP1AQ16819 746 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 OR7E24Q6IFN5 339 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 TPRG1Q6ZUI0 275 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 DCP1BQ8IZD4 617 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 SLC5A8Q8N695 610 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 POC1AQ8NBT0 407 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 LNX1Q8TBB1 728 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 DDOQ99489 341 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 MXD3Q9BW11 206 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 TMX4Q9H1E5 349 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 RAD21L1Q9H4I0 556 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 DNAJC18Q9H819 358 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 EVA1AQ9H8M9 152 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 TCP11L1Q9NUJ3 509 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 TRMT1Q9NXH9 659 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 ARHGEF38Q9NXL2 777 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 KLHL9Q9P2J3 617 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 PROCRQ9UNN8 238 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 TMEM5Q9Y2B1 443 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 PTRH2Q9Y3E5 179 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 LRP12Q9Y561 859 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 PCDHGA5Q9Y5G8 931 aa3.92□□□□□ -1.78
TOPBP1-204ENST00000505804 ASPDHA6ND91 283 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 LRRC72A6NJI9 287 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 HMGB1P1B2RPK0 211 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 PAPSS1O43252 624 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 ZNHIT1O43257 154 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 RSL1D1O76021 490 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 BEST1O76090 585 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 GH2P01242 217 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 KCNA5P22460 613 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 NRIP1P48552 1158 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 EEF1A1P68104 462 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 STK4Q13043 487 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 STXBP5Q5T5C0 1151 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 EEF1A1P5Q5VTE0 462 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 BRINP3Q76B58 766 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 ZNF534Q76KX8 674 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 DSG4Q86SJ6 1040 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 SLC9B2Q86UD5 537 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 EPHX4Q8IUS5 362 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 PM20D2Q8IYS1 436 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 NAGSQ8N159 534 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 GCSAMQ8N6F7 178 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 IL17RCQ8NAC3 791 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 SECTM1Q8WVN6 248 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 CD101Q93033 1021 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 JAKMIP2Q96AA8 810 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 PKP4Q99569 1192 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 KLHL1Q9NR64 748 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 DNAJB4Q9UDY4 337 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 RPS6KA6Q9UK32 745 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 PLAGL1Q9UM63 463 aa3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 TMEM184BQ9Y519 407 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-204ENST00000505804 ZCWPW2A0A1B0GU75 182 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 OR5K3A6NET4 321 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 A8MV72 311 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 WDR1O75083 606 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 ENTPD3O75355 529 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 WISP2O76076 250 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 FAM106CPP0CH98 169 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 SAT1P21673 171 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 NMBRP28336 390 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 EIF2DP41214 584 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 ARCN1P48444 511 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 TMF1P82094 1093 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 RPL36AP83881 106 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 PLIN5Q00G26 463 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 ILF3Q12906 894 aaKnown RBP eCLIP3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 MVPQ14764 893 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 IGSF11Q5DX21 431 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 ZDHHC20Q5W0Z9 365 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 FAM171BQ6P995 826 aa3.9□□□□□ -1.79
TOPBP1-204ENST00000505804 ZNF704Q6ZNC4 412 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms