RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 NRF1Q16656 503 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 VPS26BQ4G0F5 336 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 PITRM1Q5JRX3 1037 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 CHST15Q7LFX5 561 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-207ENST00000504761 OR10G6Q8NH81 332 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 IRF7Q92985 503 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 GPR22Q99680 433 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 CLSTN3Q9BQT9 956 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 RIOK2Q9BVS4 552 aaKnown RBP13.97□□□□□ -0.17
TCOF1-207ENST00000504761 OR2AG1Q9H205 316 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 ALDOAP04075 364 aaKnown RBP13.97□□□□□ -0.17
TCOF1-207ENST00000504761 HTR1BP28222 390 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 VIPR2P41587 438 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 TP53BP2Q13625 1128 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 DSC3Q14574 896 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 RELL1Q8IUW5 271 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 PHYKPLQ8IUZ5 450 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 ZNF513Q8N8E2 541 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-207ENST00000504761 CLP1Q92989 425 aaKnown RBP13.97□□□□□ -0.17
TCOF1-207ENST00000504761 PPM1MQ96MI6 270 aa13.97□□□□□ -0.17
TCOF1-207ENST00000504761 CA3P07451 260 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 ACADSP16219 412 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 CD68P34810 354 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-207ENST00000504761 POLD2P49005 469 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 RAB33AQ14088 237 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 SLC9B1Q4ZJI4 515 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 LRRC66Q68CR7 880 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 C22orf39Q6P5X5 142 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 TTC33Q6PID6 262 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-207ENST00000504761 SNX20Q7Z614 316 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 CILP2Q8IUL8 1156 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 AARSD1Q9BTE6 412 aaKnown RBP13.96□□□□□ -0.17
TCOF1-207ENST00000504761 CACNB4O00305 520 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-207ENST00000504761 PIP5K1BO14986 540 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 ARSDP51689 593 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 SLC18A2Q05940 514 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 Q6ZVL8 140 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 APCDD1Q8J025 514 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 CELF5Q8N6W0 485 aaKnown RBP13.96□□□□□ -0.17
TCOF1-207ENST00000504761 CCT7Q99832 543 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 NRP2O60462 931 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 CDH2P19022 906 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-207ENST00000504761 CCT8P50990 548 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 DPY19L3Q6ZPD9 716 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 STK32CQ86UX6 486 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 SCAMP4Q969E2 229 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 TOP1MTQ969P6 601 aa13.96□□□□□ -0.17
TCOF1-207ENST00000504761 MMADHCQ9H3L0 296 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-207ENST00000504761 INTS10Q9NVR2 710 aaKnown RBP13.96□□□□□ -0.17
TCOF1-207ENST00000504761 MTF2Q9Y483 593 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-207ENST00000504761 OR1I1O60431 355 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 SLC22A3O75751 556 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 GSNP06396 782 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 BMPR1AP36894 532 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 RINLQ6ZS11 566 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 C10orf82Q8WW14 230 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 REPS1Q96D71 796 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 BBS4Q96RK4 519 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 CSNK1G1Q9HCP0 422 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 SPAG4Q9NPE6 437 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 PHPT1Q9NRX4 125 aaPredicted RBP13.96□□□□□ -0.18
TCOF1-207ENST00000504761 OXSMQ9NWU1 459 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 GALPQ9UBC7 116 aa13.96□□□□□ -0.18
TCOF1-207ENST00000504761 LEF1Q9UJU2 399 aaPredicted RBP13.96□□□□□ -0.18
TCOF1-207ENST00000504761 MCM3APO60318 1980 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 A8MT66 165 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 TYROBPO43914 113 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 RALGPS1Q5JS13 557 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 IL23RQ5VWK5 629 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 TMEM25Q86YD3 366 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 SLC39A11Q8N1S5 342 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 FAM156AQ8NDB6 213 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 EEF1AKMT1Q8WVE0 214 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 OTUB1Q96FW1 271 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-207ENST00000504761 IL12RB2Q99665 862 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 B4GALT6Q9UBX8 382 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 SPACA6W5XKT8 324 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 FYNP06241 537 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 GDF5P43026 501 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 PDGFRLQ15198 375 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 WLSQ5T9L3 541 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 TMEM132CQ8N3T6 1108 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 HDDC3Q8N4P3 179 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 ATG16L2Q8NAA4 619 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 ITFG1Q8TB96 612 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 OR52E6Q96RD3 313 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 OSER1Q9NX31 292 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 MARCH4Q9P2E8 410 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-207ENST00000504761 IDO1P14902 403 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 PAOXQ6QHF9 649 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 AMIGO2Q86SJ2 522 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 KHSRPQ92945 711 aaKnown RBP eCLIP13.95□□□□□ -0.18
TCOF1-207ENST00000504761 PGAP3Q96FM1 320 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-207ENST00000504761 MAGEB10Q96LZ2 347 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-207ENST00000504761 OR52B2Q96RD2 323 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 LINC00597Q9H2U6 94 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 DNAJC11Q9NVH1 559 aa13.95□□□□□ -0.18
TCOF1-207ENST00000504761 PEX1O43933 1283 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 EPCAMP16422 314 aa13.94□□□□□ -0.18
TCOF1-207ENST00000504761 ADAM17P78536 824 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms