RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PHGDHO43175 533 aaKnown RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 TGM5O43548 720 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 UGT1A9O60656 530 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 NBNO60934 754 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ATP6AP2O75787 350 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SORBS2O94875 1100 aaKnown RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 UGT1A6P19224 532 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 UGT1A1P22309 533 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 UGT1A4P22310 534 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 FOXN2P32314 431 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 RPA3P35244 121 aaPredicted RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 UGT1A3P35503 534 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 UGT1A5P35504 534 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SOAT1P35610 550 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SERPINB10P48595 397 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 KCNK10P57789 538 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 CDK16Q00536 496 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SP2Q02086 613 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 EMC2Q15006 297 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 DEFB115Q30KQ5 88 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM214AQ32MH5 1076 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SPDYE7PQ495Y7 208 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 NHSL2Q5HYW2 709 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 FGD3Q5JSP0 725 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 BRMS1LQ5PSV4 323 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 N4BP2L1Q5TBK1 243 aaPredicted RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 PTRHD1Q6GMV3 140 aaKnown RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SCIMPQ6UWF3 145 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 C5orf46Q6UWT4 87 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 C16orf89Q6UX73 402 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 RHOUQ7L0Q8 258 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC26A9Q7LBE3 791 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 STK32CQ86UX6 486 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ARHGEF19Q8IW93 802 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 MCOLN2Q8IZK6 566 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 PGBD3Q8N328 593 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ATPAF2Q8N5M1 289 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 RDM1Q8NG50 284 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 GDPD5Q8WTR4 605 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ASZ1Q8WWH4 475 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 TRUB1Q8WWH5 349 aaKnown RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 NTAN1Q96AB6 310 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ACDQ96AP0 544 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 HPDLQ96IR7 371 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 MAGEB18Q96M61 343 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF578Q96N58 590 aaPredicted RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 YME1L1Q96TA2 773 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ZBED2Q9BTP6 218 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 TBCDQ9BTW9 1192 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 NT5C1AQ9BXI3 368 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 REG4Q9BYZ8 158 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 C12orf49Q9H741 205 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 LRRC19Q9H756 370 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 ELAC1Q9H777 363 aaKnown RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 EFCAB1Q9HAE3 211 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 UGT1A7Q9HAW7 530 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 UGT1A10Q9HAW8 530 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 UGT1A8Q9HAW9 530 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 TMEM8AQ9HCN3 771 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 MRPL40Q9NQ50 206 aaKnown RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 IMPAD1Q9NX62 359 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 NINJ2Q9NZG7 142 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 FBXL21Q9UKT6 434 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 CDV3Q9UKY7 258 aaKnown RBP3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 VPS4AQ9UN37 437 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC27A5Q9Y2P5 690 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 SESN1Q9Y6P5 492 aa3.65□□□□□ -1.83
PCDH11X-208ENST00000504220 KBTBD13C9JR72 458 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 PRR23D1E9PI22 279 aaPredicted RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 DLGAP1O14490 977 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF197O14709 1029 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 GSC2O15499 205 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 HS6ST1O60243 411 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CCNT2O60583 730 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 MRPS14O60783 128 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 RHOBTB1O94844 696 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 UGT2B4P06133 528 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 PRR23D2P0DMB1 279 aaPredicted RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ACADMP11310 421 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 UQCRBP14927 111 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 NDUFB7P17568 137 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 TFEBP19484 476 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 GPD1P21695 349 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ITGB8P26012 769 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 SFNP31947 248 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 HPCAL1P37235 193 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 KIR3DL2P43630 455 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CASP5P51878 434 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 PHC1P78364 1004 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CDKL1Q00532 357 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 IL5RAQ01344 420 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 POU4F1Q01851 419 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 MMRN1Q13201 1228 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 TMEM132DQ14C87 1099 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 GOLGA7BQ2TAP0 167 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 TOR1AIP1Q5JTV8 583 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 PDPK2PQ6A1A2 396 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 UNQ6494/PRO21346Q6UXR6 183 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 MACC1Q6ZN28 852 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms