RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ITGA2BP08514 1039 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 RABIFP47224 123 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 RACK1P63244 317 aaKnown RBP20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 DOK6Q6PKX4 331 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 NDNQ99608 321 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 MTO1Q9Y2Z2 717 aaKnown RBP20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 HMX2A2RU54 273 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 TMEM202A6NGA9 273 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 LILRB5O75023 590 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 ESR1P03372 595 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 RPS3P23396 243 aaKnown RBP eCLIP20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 POLD2P49005 469 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 SERPINB9P50453 376 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 SIM2Q14190 667 aaPredicted RBP20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 RASA2Q15283 850 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 KRT71Q3SY84 523 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 RBM20Q5T481 1227 aaKnown RBP20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 MROH9Q5TGP6 573 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 LYSMD4Q5XG99 296 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 GPATCH11Q8N954 259 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 ACVR1CQ8NER5 493 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 FAM174AQ8TBP5 190 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 ZCCHC2Q9C0B9 1178 aaKnown RBP20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 CCDC68Q9H2F9 335 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 TM9SF3Q9HD45 589 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 EURLQ9NYK6 297 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 PCDHB1Q9Y5F3 818 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 KRT38O76015 456 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 RHOBTB1O94844 696 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 PKMP14618 531 aaKnown RBP20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 ZNF8P17098 575 aaPredicted RBP20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 CD38P28907 300 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 THOP1P52888 689 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 BMPR2Q13873 1038 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 NFATC4Q14934 902 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 CTSL3PQ5NE16 218 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 TPRG1LQ5T0D9 272 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 LGSNQ5TDP6 509 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 MFSD2AQ8NA29 543 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 KLHDC7BQ96G42 594 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 RUFY1Q96T51 708 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 CORO1CQ9ULV4 474 aaPredicted RBP20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 SPAG17Q6Q759 2223 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 OR2AG2A6NM03 316 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 AGPSO00116 658 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 SGTAO43765 313 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 THEGLP0DJG4 465 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 CNTFP26441 200 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 HTR1BP28222 390 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 KIAA1024LP59773 190 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 PTRHD1Q6GMV3 140 aaKnown RBP20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 GPR22Q99680 433 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 AARSD1Q9BTE6 412 aaKnown RBP20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 GNPTGQ9UJJ9 305 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 VWA7Q9Y334 891 aa20.14■□□□□ 0.81
CDC42SE2-206ENST00000503291 FAM95CA0A1B0GW59 222 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 A0A1W2PR77 199 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 IQCF5A8MTL0 148 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 KRT37O76014 449 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 WNT1P04628 370 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 CEACAM5P06731 702 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 CTSCP53634 463 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 GTF2H3Q13889 308 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 TMEM220Q6QAJ8 160 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 ENPP7Q6UWV6 458 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 MACC1Q6ZN28 852 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 TAOK1Q7L7X3 1001 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 CYP4X1Q8N118 509 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 SLC22A18ASQ8N1D0 253 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 RIBC1Q8N443 379 aaPredicted RBP20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 DCLK2Q8N568 766 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 SLC17A4Q9Y2C5 497 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 VPS13AQ96RL7 3174 aa20.13■□□□□ 0.81
CDC42SE2-206ENST00000503291 IQANK1A0A1B0GTG1 560 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 BCAT2O15382 392 aaPredicted RBP20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 NUAK1O60285 661 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 AP2A2O94973 939 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 FUCA1P04066 466 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 SNRPAP09012 282 aaKnown RBP20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 OR56A5P0C7T3 313 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 SAT1P21673 171 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 KELP23276 732 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 ILF2Q12905 390 aaKnown RBP20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 TMED2Q15363 201 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 LAYNQ6UX15 382 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 CROCCP2Q86T23 111 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 IQCHQ86VS3 1027 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 OR56A4Q8NGH8 313 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 ELMO2Q96JJ3 720 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 WDR92Q96MX6 357 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 GPR27Q9NS67 375 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 TMEM74BQ9NUR3 256 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 SLC39A10Q9ULF5 831 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 COMMD10Q9Y6G5 202 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 PIKFYVEQ9Y2I7 2098 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 NIPSNAP2O75323 286 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 HECTD2Q5U5R9 776 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 PRR23BQ6ZRT6 265 aa20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 BEND7Q8N7W2 519 aaPredicted RBP20.12■□□□□ 0.81
CDC42SE2-206ENST00000503291 CAB39LQ9H9S4 337 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms