RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ISG20Q96AZ6 181 aaKnown RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 ARHGEF26Q96DR7 871 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 RNF31Q96EP0 1072 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 HMCESQ96FZ2 354 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 CELF6Q96J87 481 aaKnown RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 WDR92Q96MX6 357 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 NUDT22Q9BRQ3 303 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 TUBGCP2Q9BSJ2 902 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 SELENOOQ9BVL4 669 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 C1QTNF7Q9BXJ2 289 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 TTYH3Q9C0H2 523 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 MAGEH1Q9H213 219 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 VPS16Q9H269 839 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 DPEP2Q9H4A9 486 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 PCDH12Q9NPG4 1184 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 NLRC4Q9NPP4 1024 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 SAMSN1Q9NSI8 373 aaKnown RBP5.52□□□□□ -1.53
SPTA1-209ENST00000498708 TMEM248Q9NWD8 314 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 GPATCH2LQ9NWQ4 482 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 OCIAD1Q9NX40 245 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 APPL1Q9UKG1 709 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 ATRQ13535 2644 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 STAB1Q9NY15 2570 aa5.52□□□□□ -1.53
SPTA1-209ENST00000498708 JMJD1CQ15652 2540 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 FN1P02751 2386 aaKnown RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 CSPG4Q6UVK1 2322 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 LRP4O75096 1905 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 TRBV23OR9-2A0A075B6M9 112 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 IGHV5-10-1A0A0J9YXX1 117 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 ANKUB1A6NFN9 424 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 TMEM202A6NGA9 273 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 C2CD4BA6NLJ0 364 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 J3KR12 359 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 CCP110O43303 1012 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 BUB1BO60566 1050 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 FBXO24O75426 580 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 KRT3P12035 628 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 CD99P14209 185 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 UCHL3P15374 230 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 CHRNB2P17787 502 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 GPD1P21695 349 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 RFC1P35251 1148 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 RGRP47804 291 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 BLKP51451 505 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 PMS2P54278 862 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 MAZP56270 477 aaKnown RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 HDAC4P56524 1084 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 GEMIN4P57678 1058 aaKnown RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 OR1D5P58170 312 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 POLR2FP61218 127 aaKnown RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 B4GALNT1Q00973 533 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 MC1RQ01726 317 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 FMO1Q01740 532 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 ELP6Q0PNE2 266 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 BIRC2Q13490 618 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 ARHGEF7Q14155 803 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 UGP2Q16851 508 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 MAP9Q49MG5 647 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 ACBD5Q5T8D3 534 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 MANEALQ5VSG8 457 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 JMJD6Q6NYC1 403 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 ERAP2Q6P179 960 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 WDR59Q6PJI9 974 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 RINLQ6ZS11 566 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 BNIPLQ7Z465 357 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 SLFN11Q7Z7L1 901 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 ZSCAN30Q86W11 494 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 PELI3Q8N2H9 469 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 RTL3Q8N8U3 475 aaKnown RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 GLIS1Q8NBF1 620 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 GPR156Q8NFN8 814 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 OR1E3Q8WZA6 343 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 FUBP1Q96AE4 644 aaKnown RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 KIAA1143Q96AT1 154 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 SNRNP40Q96DI7 357 aaKnown RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 CCDC74BQ96LY2 380 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 ZNF830Q96NB3 372 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 PCDHB18PQ96TA0 734 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 CTRCQ99895 268 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 DDA1Q9BW61 102 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 TRIM8Q9BZR9 551 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 TMEM168Q9H0V1 697 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 NOL6Q9H6R4 1146 aaKnown RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 FGF22Q9HCT0 170 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 ASF1BQ9NVP2 202 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 SLC39A1Q9NY26 324 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 ADAM22Q9P0K1 906 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 LRIT1Q9P2V4 623 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 LHX3Q9UBR4 397 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 UBA2Q9UBT2 640 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 FAM8A1Q9UBU6 413 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 FEZ2Q9UHY8 353 aaPredicted RBP5.51□□□□□ -1.53
SPTA1-209ENST00000498708 NEU3Q9UQ49 428 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 CUBNO60494 3623 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 ANK2Q01484 3957 aa5.51□□□□□ -1.53
SPTA1-209ENST00000498708 PRRC2AP48634 2157 aaKnown RBP5.5□□□□□ -1.53
SPTA1-209ENST00000498708 MYO7BQ6PIF6 2116 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 ZGRF1Q86YA3 2104 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 GOLGA6CA6NDK9 693 aa5.5□□□□□ -1.53
SPTA1-209ENST00000498708 GOLGA6BA6NDN3 693 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms