RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 NKAPQ8N5F7 415 aaKnown RBP12.34□□□□□ -0.43
AFF3-215ENST00000498090 PTGR2Q8N8N7 351 aaPredicted RBP12.34□□□□□ -0.43
AFF3-215ENST00000498090 MYLIPQ8WY64 445 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 TBATAQ96M53 351 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 ATOH8Q96SQ7 321 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 CCDC68Q9H2F9 335 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 AKTIPQ9H8T0 292 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 SFXN1Q9H9B4 322 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 TNFRSF12AQ9NP84 129 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 MID1IP1Q9NPA3 183 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 SDR39U1Q9NRG7 319 aaPredicted RBP12.34□□□□□ -0.43
AFF3-215ENST00000498090 PNPLA3Q9NST1 481 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 NLE1Q9NVX2 485 aaPredicted RBP12.34□□□□□ -0.43
AFF3-215ENST00000498090 POLR3BQ9NW08 1133 aaPredicted RBP12.34□□□□□ -0.43
AFF3-215ENST00000498090 MARCH4Q9P2E8 410 aaPredicted RBP12.34□□□□□ -0.43
AFF3-215ENST00000498090 SEPT3Q9UH03 358 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 DPP7Q9UHL4 492 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 DNAJC15Q9Y5T4 150 aa12.34□□□□□ -0.43
AFF3-215ENST00000498090 XYLBO75191 536 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 CDK14O94921 469 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 MLYCDO95822 493 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 CHEK2O96017 543 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 NPPAP01160 153 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 PYGLP06737 847 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 HMBSP08397 361 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 PTPN2P17706 415 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 MSX2P35548 267 aaPredicted RBP12.33□□□□□ -0.44
AFF3-215ENST00000498090 ATP5C1P36542 298 aaKnown RBP12.33□□□□□ -0.44
AFF3-215ENST00000498090 SLC7A2P52569 658 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 TUBA4AP68366 448 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 SH3BP2P78314 561 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 RAD51Q06609 339 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 TMEM259Q4ZIN3 620 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 C6orf10Q5SRN2 563 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 INTS11Q5TA45 600 aaKnown RBP12.33□□□□□ -0.44
AFF3-215ENST00000498090 RAP1GAP2Q684P5 730 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 CLEC6AQ6EIG7 209 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 PPP4R4Q6NUP7 873 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 ZNF549Q6P9A3 640 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 TMC5Q6UXY8 1006 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 CYHR1Q6ZMK1 362 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 GALNT4Q8N4A0 578 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 EFHBQ8N7U6 833 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 HM13Q8TCT9 377 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 TWIST2Q8WVJ9 160 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 IGSF8Q969P0 613 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 WBP2Q969T9 261 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 PTERQ96BW5 349 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 MGME1Q9BQP7 344 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 TRIM54Q9BYV2 358 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 PDFQ9HBH1 243 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 CCM2LQ9NUG4 571 aaPredicted RBP12.33□□□□□ -0.44
AFF3-215ENST00000498090 DZANK1Q9NVP4 752 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 DNMT3LQ9UJW3 386 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 MTCH2Q9Y6C9 303 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 COMMD10Q9Y6G5 202 aa12.33□□□□□ -0.44
AFF3-215ENST00000498090 XIRP2A4UGR9 3374 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 NYNRINQ9P2P1 1898 aaKnown RBP12.32□□□□□ -0.44
AFF3-215ENST00000498090 CCDC162PA2VCL2 907 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 GRXCR2A6NFK2 248 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 F5H5T6 163 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 PDLIM1O00151 329 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 MTHFD2P13995 350 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 GFAPP14136 432 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 IL10P22301 178 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 KCNC1P48547 511 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 KCNQ1P51787 676 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 ZXDBP98169 803 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 CDKL1Q00532 357 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 RPS6KA2Q15349 733 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 TEAD2Q15562 447 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 TAF1AQ15573 450 aaPredicted RBP12.32□□□□□ -0.44
AFF3-215ENST00000498090 GEN1Q17RS7 908 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 C6orf52Q5T4I8 152 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 ANKS6Q68DC2 871 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 LCN8Q6JVE9 175 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 SYCE2Q6PIF2 218 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 TMEM184AQ6ZMB5 413 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 PRR23BQ6ZRT6 265 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 ERMP1Q7Z2K6 904 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 CARM1Q86X55 608 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 CAMK1DQ8IU85 385 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 FUNDC1Q8IVP5 155 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 FBXO39Q8N4B4 442 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 ARL14EPQ8N8R7 260 aaPredicted RBP12.32□□□□□ -0.44
AFF3-215ENST00000498090 MFSD2AQ8NA29 543 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 OR52K2Q8NGK3 314 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 BLOC1S5Q8TDH9 187 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 SMG7Q92540 1137 aaKnown RBP12.32□□□□□ -0.44
AFF3-215ENST00000498090 MRPS31Q92665 395 aaKnown RBP12.32□□□□□ -0.44
AFF3-215ENST00000498090 SLC45A3Q96JT2 553 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 DNAJC1Q96KC8 554 aaKnown RBP12.32□□□□□ -0.44
AFF3-215ENST00000498090 PRPF18Q99633 342 aaKnown RBP12.32□□□□□ -0.44
AFF3-215ENST00000498090 KLF16Q9BXK1 252 aaPredicted RBP12.32□□□□□ -0.44
AFF3-215ENST00000498090 ANKRD60Q9BZ19 345 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 PCDHAC1Q9H158 963 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 COQ10BQ9H8M1 238 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 TUBA8Q9NY65 449 aaPredicted RBP12.32□□□□□ -0.44
AFF3-215ENST00000498090 LMCD1Q9NZU5 365 aa12.32□□□□□ -0.44
AFF3-215ENST00000498090 ACTR3BQ9P1U1 418 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms