RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 MLLT10P55197 1068 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 KRTAP10-8P60410 259 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 GSTA3Q16772 222 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 ALG11Q2TAA5 492 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 COL28A1Q2UY09 1125 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 SLC9B1Q4ZJI4 515 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 MFSD6Q6ZSS7 791 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 DPPA4Q7L190 304 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 CACNA2D4Q7Z3S7 1137 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 ESX1Q8N693 406 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 BMPERQ8N8U9 685 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 ST8SIA4Q92187 359 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 KIF1BPQ96EK5 621 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 ACOX2Q99424 681 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 TMEM47Q9BQJ4 181 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 MCRIP2Q9BUT9 160 aaKnown RBP3.44□□□□□ -1.86
SMC4-227ENST00000497984 PRKRIP1Q9H875 184 aaPredicted RBP3.44□□□□□ -1.86
SMC4-227ENST00000497984 INTS10Q9NVR2 710 aaKnown RBP3.44□□□□□ -1.86
SMC4-227ENST00000497984 KLHL9Q9P2J3 617 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 ZNF318Q5VUA4 2279 aa3.44□□□□□ -1.86
SMC4-227ENST00000497984 A0A0G2JNG1 304 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 MEIOCA2RUB1 952 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 LRRC53A6NM62 1247 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 CLIC2O15247 247 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 SRSF10O75494 262 aaKnown RBP3.43□□□□□ -1.86
SMC4-227ENST00000497984 FGFBP1Q14512 234 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 KIR2DS5Q14953 304 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 FFAR4Q5NUL3 377 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 ADAMTSL4-AS1Q5T5F5 129 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 PAPD4Q6PIY7 484 aaKnown RBP3.43□□□□□ -1.86
SMC4-227ENST00000497984 Q75L30 129 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 ARMC8Q8IUR7 673 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 NR1H4Q96RI1 486 aaPredicted RBP3.43□□□□□ -1.86
SMC4-227ENST00000497984 PSD2Q9BQI7 771 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 SYT11Q9BT88 431 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 RANBP17Q9H2T7 1088 aaKnown RBP3.43□□□□□ -1.86
SMC4-227ENST00000497984 RAD21L1Q9H4I0 556 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 TRPC7Q9HCX4 862 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 SIX2Q9NPC8 291 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 ASAH2Q9NR71 780 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 ASIC3Q9UHC3 531 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 KCNJ14Q9UNX9 436 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 AAR2Q9Y312 384 aaKnown RBP3.43□□□□□ -1.86
SMC4-227ENST00000497984 KDM3AQ9Y4C1 1321 aa3.43□□□□□ -1.86
SMC4-227ENST00000497984 A0A1B0GVC2 190 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 TMEM178BH3BS89 294 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 HS3ST1O14792 307 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 NADKO95544 446 aaPredicted RBP3.42□□□□□ -1.86
SMC4-227ENST00000497984 MLYCDO95822 493 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 ABCD3P28288 659 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 NEXNQ0ZGT2 675 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 SLC9C2Q5TAH2 1124 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 ZNF613Q6PF04 617 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 SH2D5Q6ZV89 423 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 PPHLN1Q8NEY8 458 aaKnown RBP3.42□□□□□ -1.86
SMC4-227ENST00000497984 IGSF8Q969P0 613 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 PCGF1Q9BSM1 259 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 JMJD4Q9H9V9 463 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 TMEM98Q9Y2Y6 226 aa3.42□□□□□ -1.86
SMC4-227ENST00000497984 E9PQ18 207 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 M0QZ24 198 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 SYNCRIPO60506 623 aaKnown RBP3.41□□□□□ -1.86
SMC4-227ENST00000497984 SEC31AO94979 1220 aaKnown RBP3.41□□□□□ -1.86
SMC4-227ENST00000497984 PYGLP06737 847 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 GATA2P23769 480 aaPredicted RBP3.41□□□□□ -1.86
SMC4-227ENST00000497984 EPHA8P29322 1005 aaPredicted RBP3.41□□□□□ -1.86
SMC4-227ENST00000497984 HOXC9P31274 260 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 BMXP51813 675 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 MAD2L1Q13257 205 aaPredicted RBP3.41□□□□□ -1.86
SMC4-227ENST00000497984 OLIG2Q13516 323 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 DRAP1Q14919 205 aaPredicted RBP3.41□□□□□ -1.86
SMC4-227ENST00000497984 FAM69AQ5T7M9 428 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 LCN10Q6JVE6 187 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 BHLHB9Q6PI77 547 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 LONP2Q86WA8 852 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 CCDC13Q8IYE1 715 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 IL17REQ8NFR9 667 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 DNAAF4Q8WXU2 420 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 C18orf12Q96KH6 178 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 IWS1Q96ST2 819 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 AGXT2Q9BYV1 514 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 USP44Q9H0E7 712 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 UBN1Q9NPG3 1134 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 ZNF71Q9NQZ8 489 aaPredicted RBP3.41□□□□□ -1.86
SMC4-227ENST00000497984 SLC6A13Q9NSD5 602 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 ATAD3AQ9NVI7 634 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 TAS2R10Q9NYW0 307 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 HAO1Q9UJM8 370 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 GTF2A1LQ9UNN4 478 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 CRYL1Q9Y2S2 319 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 FLT1P17948 1338 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 STK36Q9NRP7 1315 aa3.41□□□□□ -1.86
SMC4-227ENST00000497984 A0A1W2PRG0 241 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 MAGEB17A8MXT2 336 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 H0YIN7 160 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 SEC14L2O76054 403 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 CLPTM1O96005 669 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 TPOP07202 933 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 PLA2G4BP0C869 781 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms